LOCUS AK297169 2301 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54700 complete cds, highly similar to
Nucleolar protein 10.
ACCESSION AK297169
VERSION AK297169.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2301)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2301
/clone="FCBBF2001602"
/clone_lib="FCBBF2"
/db_xref="H-InvDB:HIT000491793"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 115..2103
/codon_start=1
/note="highly similar to Nucleolar protein 10"
/protein_id="BAG59662.1"
/transl_table=1
/translation="MQVSSLNEVKIYSLSCGKSLPEWLSDRKKRALQKKDVDVRRRIE
LIQDFEMPTVCTTIKVSKDGQYILATVVTFEILSDDYSKIVFLHNDRYIEFHSQSGFY
YKTRIPKFGRDFSYHYPSCDLYFVGASSEVYRLNLEQGRYLNPLQTDAAENNVCDINS
VHGLFATGTIEGRVECWDPRTRNRVGLLDCALNSVTADSEINSLPTISALKFNGALTM
AVGTTTGQVLLYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLILSADSRIVKMWNKNS
GKIFTSLEPEHDLNDVCLYPNSGMLLTANETPKMGIYYIPVLGPAPRWCSFLDNLTEE
LEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNP
FAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEEKQKSTWKKKVKSL
PNILTDDRFKVMFENPDFQVDEESEEFRLLNPLVSKISEKRKKKLRLLEQQELREKEE
EEEPEGKPSDAESSESSDDEKAWVEEVRKQRRLLQQEEKVKRQERLKEDQQTVLKPQF
YEIKAGEEFRSFKDSATKQKLMNKTLEDRLKIEAKNGTLSVSDTTVGSKQLTFTLKRS
EQQKKQQEAEKLHRQERKRLRRSAGHLKSRHKRGRSFH"
BASE COUNT 738 a 454 c 552 g 557 t
ORIGIN
1 agtcggcgcc agcggccgca cgccgcggag caggggctcg gaggtcccgg gattacggtg
61 ctcgagcacg ctggtgggaa aggacccggg acttgaacag tgttgtgcgg cgccatgcag
121 gtctccagcc tcaatgaggt gaagatttac agcctcagct gcggcaagtc ccttcctgag
181 tggctttctg ataggaagaa gagagcgcta cagaagaaag atgtagatgt ccgtaggaga
241 attgaactta ttcaggactt tgaaatgcct actgtgtgta ccactattaa ggtgtcaaaa
301 gatggacagt acattttagc aactgttgtc acctttgaaa ttttgtctga tgactactca
361 aagattgtct tcttacataa tgatagatac attgaatttc attcgcaatc aggtttttac
421 tacaaaacca gaataccaaa gtttgggaga gatttctctt accactatcc atcctgtgac
481 ttgtactttg ttggtgcaag ttctgaagtt tataggttaa acttagaaca aggacgatac
541 ctgaatcctc tacaaactga tgctgcggag aataatgttt gtgacataaa ttcagtgcat
601 ggcttgtttg ccacaggaac catagagggt agagtggagt gctgggaccc aagaactcga
661 aacagagttg gcctgttaga ctgcgcctta aacagtgtca cagcagattc agagataaac
721 agtttaccaa caatctctgc tttgaaattt aatggtgcct tgaccatggc agttggaaca
781 accacagggc aggttttatt atatgacctt cgatctgata agccattgct agttaaagat
841 caccagtatg ggctgcccat taagtccgtt catttccagg attcattaga tctgattttg
901 tctgctgact ctcgaattgt caagatgtgg aataagaact ccggaaaaat atttacttcc
961 ttggagccag agcatgacct taatgatgtt tgtctctacc ccaactcagg catgctcctg
1021 acggccaatg aaacccccaa gatgggcatc tattacattc cagttttggg tcctgctcct
1081 cggtggtgtt ccttcttaga caacttgacc gaagaattag aagagaatcc agaaagcaca
1141 gtctatgatg attataaatt tgtcaccaag aaagaccttg aaaatttagg gctcacccac
1201 ctcattggat ctcctttcct ccgggcatat atgcatgggt ttttcatgga tataagactc
1261 tatcacaagg tgaaactgat ggtaaatcca tttgcttatg aagaatatag gaaagataaa
1321 atacgacaga aaatagaaga aacacgtgca cagagagtcc agttaaagaa attgccaaaa
1381 gttaacaaag agctggcact taaattaatt gaggaagaag aggagaagca gaaatctaca
1441 tggaaaaaga aagttaagag tcttcctaat attctcaccg atgatcgatt taaagttatg
1501 tttgagaacc ctgacttcca agtagatgaa gagagtgaag aatttaggct tctgaatcca
1561 cttgtttcaa aaattagtga aaaaaggaag aagaaactaa gactcttaga gcaacaagaa
1621 cttcgtgaaa aagaagagga ggaagagccg gaaggaaaac caagtgatgc agaaagttcg
1681 gagagttcag atgatgaaaa agcctgggtt gaagaggtca ggaagcaacg cagactcctc
1741 cagcaggagg aaaaagtgaa gcggcaggaa cgactcaagg aggaccagca gacagtccta
1801 aagccccagt tttatgagat caaagcagga gaagaattta gaagcttcaa agattctgcc
1861 acaaagcaga aactgatgaa caaaaccctt gaagatcgtt tgaaaattga agcaaaaaat
1921 gggacattga gtgtatccga caccaccgtt ggcagcaaac aattgacatt cacgttaaag
1981 aggtctgaac agcagaagaa gcaacaggag gctgagaaac tacatcgaca agaaaggaaa
2041 agactccgtc gttcggccgg acacctgaag tcaagacaca aaagaggacg gtcgtttcat
2101 tgatttggga agtggtccta cctgtgatta gggaggggta cgtctccccc aaactgatca
2161 tcgttagggt gttaaacaca gacgaggaaa cacacgtttt taaagttcat gtacgttctt
2221 gtacacagag gtaaagattt gaaaacctgt gccttgtggg ttggactttg aagctggccc
2281 cgccgacggc caccgcacag c
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