LOCUS AK297159 2288 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60675 complete cds, highly similar to
ATP-dependent RNA helicase DDX3X (EC 3.6.1.-).
ACCESSION AK297159
VERSION AK297159.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2288)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2288
/clone="FCBBF1000151"
/clone_lib="FCBBF1"
/db_xref="H-InvDB:HIT000491783"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 92..1690
/codon_start=1
/note="highly similar to ATP-dependent RNA helicase DDX3X
(EC 3.6.1.-)"
/protein_id="BAG59657.1"
/transl_table=1
/translation="MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLR
NREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRS
DYDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINF
EKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKR
DLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTR
ELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERG
KIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML
ARDFLDEYIFLAVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHY
KGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGG
YGGFYNSDGYGGNYNSQGVDWWGN"
BASE COUNT 654 a 434 c 589 g 611 t
ORIGIN
1 agagccgcag ttctcccgtg agagggcctt cgcggtggaa caaacactcg cttagcagcg
61 gaagactccg agttctcggt actcttcagg gatgagtcat gtggcagtgg aaaatgcgct
121 cgggctggac cagcagtttg ctggcctaga cctgaactct tcagataatc agagtggagg
181 aagtacagcc agcaaagggc gctatattcc tcctcattta aggaaccgag aagctactaa
241 aggtttctac gataaagaca gttcagggtg gagttctagc aaagataagg atgcgtatag
301 cagttttgga tctcgtagtg attcaagagg gaagtctagc ttcttcagtg atcgtggaag
361 tggatcaagg ggaaggtttg atgatcgtgg acggagtgat tacgatggca ttggcagccg
421 tggtgacaga agtggctttg gcaaatttga acgtggtgga aacagtcgct ggtgtgacaa
481 atcagatgaa gatgattggt caaaaccact cccaccaagt gaacgcttgg aacaggaact
541 cttttctgga ggcaacactg ggattaattt tgagaaatac gatgacattc cagttgaggc
601 aacaggcaac aactgtcctc cacatattga aagtttcagt gatgttgaga tgggagaaat
661 tatcatggga aacattgagc ttactcgtta tactcgccca actccagtgc aaaagcatgc
721 tattcctatt atcaaagaga aaagagactt gatggcttgt gcccaaacag ggtctggaaa
781 aactgcagca tttctgttgc ccatcttgag tcagatttat tcagatggtc caggcgaggc
841 tttgagggcc atgaaggaaa atggaaggta tgggcgccgc aaacaatacc caatctcctt
901 ggtattagca ccaacgagag agttggcagt acagatctac gaggaagcca gaaaattttc
961 ataccgatct agagttcgtc cttgcgtggt ttatggtggt gccgatattg gtcagcagat
1021 tcgagacttg gaacgtggat gccatttgtt agtagccact ccaggacgtc tagtggatat
1081 gatggaaaga ggaaagattg gattagactt ttgcaaatac ttggtgttag atgaagctga
1141 tcggatgttg gatatggggt ttgagcctca gattcgtaga atagtcgaac aagatactat
1201 gcctccaaag ggtgtccgcc acactatgat gtttagtgct acttttccta aggaaataca
1261 gatgctggct cgtgatttct tagatgaata tatcttcttg gctgtaggaa accttggcct
1321 ggcaacctca ttctttaacg agaggaacat aaatattact aaggatttgt tggatcttct
1381 tgttgaagct aaacaagaag tgccgtcttg gttagaaaac atggcttatg aacaccacta
1441 caagggtagc agtcgtggac gttctaagag tagcagattt agtggagggt ttggtgccag
1501 agactaccga caaagtagcg gtgccagcag ttccagcttc agcagcagcc gcgcaagcag
1561 cagccgcagt ggcggaggtg gccacggtag cagcagagga tttggtggag gtggctatgg
1621 aggcttttac aacagtgatg gatatggagg aaattataac tcccaggggg ttgactggtg
1681 gggtaactga gcctgctttg cagtaggtca ccctgccaaa caagctaata tggaaaccac
1741 atgtaactta gccagactat accttgtgta gcttcaagaa ctcgcagtac attaccagct
1801 gtgattctcc actgaaattt tttttttaag ggagctcaag gtcacaagaa gaaatgaaag
1861 gaacaatcag cagccctgtt cagaaggtgg tttgaagact tcattgctgt agtttggatt
1921 aactcccctc ccgcctaccc ccatcccaaa ctgcatttat aattttgtga ctgaggatca
1981 tttgtttgtt aatgtactgt gcctttaact ttagacaact ttttattttg atgtcctgtt
2041 ggctcagtaa tgctcaagat atcaattgtt ttgacaaaat aaatttactg aacttgggct
2101 aaaatcaaac cttggcacac aggtgtgata caacttaaca ggaatcatcg attcatccat
2161 aaataatata aggaaaaact tatgcggtag cctgcattag ggctttttga tacttgcaga
2221 ttgggggaaa acaacaaatg tcttgaagca tattaatgga attagtttct aatgtggcaa
2281 actgtatt
//