LOCUS AK297155 1608 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56496 complete cds, highly similar to
Integrin alpha-IIb precursor.
ACCESSION AK297155
VERSION AK297155.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1608)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1608
/cell_line="TF-1"
/cell_type="erythroleukemia"
/clone="ERLTF2001545"
/clone_lib="ERLTF2"
/db_xref="H-InvDB:HIT000491779"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 33..1598
/codon_start=1
/note="highly similar to Integrin alpha-IIb precursor"
/protein_id="BAG59654.1"
/transl_table=1
/translation="MARALCPLQALWLLEWVLLLLGPCAAPPAWALNLDPVQLTFYAG
PNGSQFGFSLDFHKDSHGRVAIVVGAPRTLGPSQEETGGVFLCPWRAEGGQCPSLLFD
LRDETRNVGSQTLQTFKARQGLGASVVSWSDVIVACAPWQHWNVLEKTEEAEKTPVGS
CFLAQPESGRRAEYSPCRGNTLSRIYVENDFSWDKRYCEAGFSSVVTQAGELVLGAPG
GYYFLGLLAQAPVADIFSSYRPGILLWHVSSQSLSFDSSNPEYFDGYWGYSVAVGEFD
GDLNTTEYVVGAPTWSWTLGAVEILDSYYQRLHRLRGEQMASYFGHSVAVTDVNGDGR
HDLLVGAPLYMESRADRKLAEVGRVYLFLQPRGPHALGAPSLLLTGTQLYGRFGSAIA
PLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLDSPFPTGSAFGF
SLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPVVKASVQLLVQDSLNPAVKSCVLPQ
TKTPVSCFNIQFS"
BASE COUNT 284 a 475 c 505 g 344 t
ORIGIN
1 attcctgcct gggaggttgt ggaagaagga agatggccag agctttgtgt ccactgcaag
61 ccctctggct tctggagtgg gtgctgctgc tcttgggacc ttgtgctgcc cctccagcct
121 gggccttgaa cctggaccca gtgcagctca ccttctatgc aggccccaat ggcagccagt
181 ttggattttc actggacttc cacaaggaca gccatgggag agtggccatc gtggtgggcg
241 ccccgcggac cctgggcccc agccaggagg agacgggcgg cgtgttcctg tgcccctgga
301 gggccgaggg cggccagtgc ccctcgctgc tctttgacct ccgtgatgag acccgaaatg
361 taggctccca aactttacaa accttcaagg cccgccaagg actgggggcg tcggtcgtca
421 gctggagcga cgtcattgtg gcctgcgccc cctggcagca ctggaacgtc ctagaaaaga
481 ctgaggaggc tgagaagacg cccgtaggta gctgcttttt ggctcagcca gagagcggcc
541 gccgcgccga gtactccccc tgtcgcggga acaccctgag ccgcatttac gtggaaaatg
601 attttagctg ggacaagcgt tactgtgaag cgggcttcag ctccgtggtc actcaggccg
661 gagagctggt gcttggggct cctggcggct attatttctt aggtctcctg gcccaggctc
721 cagttgcgga tattttctcg agttaccgcc caggcatcct tttgtggcac gtgtcctccc
781 agagcctctc ctttgactcc agcaacccag agtacttcga cggctactgg gggtactcgg
841 tggccgtggg cgagttcgac ggggatctca acactacaga atatgtcgtc ggtgccccca
901 cttggagctg gaccctggga gcggtggaaa ttttggattc ctactaccag aggctgcatc
961 ggctgcgcgg agagcagatg gcgtcgtatt ttgggcattc agtggctgtc actgacgtca
1021 acggggatgg gaggcatgat ctgctggtgg gcgctccact gtatatggag agccgggcag
1081 accgaaaact ggccgaagtg gggcgtgtgt atttgttcct gcagccgcga ggcccccacg
1141 cgctgggtgc ccccagcctc ctgctgactg gcacacagct ctatgggcga ttcggctctg
1201 ccatcgcacc cctgggcgac ctcgaccggg atggctacaa tgacattgca gtggctgccc
1261 cctacggggg tcccagtggc cggggccaag tgctggtgtt cctgggtcag agtgaggggc
1321 tgaggtcacg tccctcccag gtcctggaca gccccttccc cacaggctct gcctttggct
1381 tctcccttcg aggtgccgta gacatcgatg acaacggata cccagacctg atcgtgggag
1441 cttacggggc caaccaggtg gctgtgtaca gagctcagcc agtggtgaag gcctctgtcc
1501 agctactggt gcaagattca ctgaatcctg ctgtgaagag ctgtgtccta cctcagacca
1561 agacacccgt gagctgcttc aacatccagt tctcgtaagc tgcgactc
//