LOCUS AK297119 2846 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54020 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein U. ACCESSION AK297119 VERSION AK297119.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2846) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2846 /cell_type="normal dermal fibroblasts (Neonatal Skin) (NHDF2564)" /clone="DFNES2005604" /clone_lib="DFNES2" /db_xref="H-InvDB:HIT000491743" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="primary culture, normal dermal fibroblasts" /organism="Homo sapiens" CDS 176..2530 /codon_start=1 /note="highly similar to Heterogeneous nuclear ribonucleoprotein U" /protein_id="BAG59625.1" /transl_table=1 /translation="MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDD EEAGGRPAMEPGNGSLDLGGDSAGRSGAGLEQEAAAGGDEEEEEEEEEEEGISALDGD QMELGEENGDDQGFQEGEDELGDEEEGAGDENGHGEQQPQPPATQQQQPQQQRGAAKE AAGKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKGGDKKRGVKRPREDHGRGYFE YIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFA FLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEE EFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFK ISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGP EEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADT GKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVC PKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKL LEQYKEESKKALPPEKKQNTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGA PGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRAPVFPGRGSYSNRGNYNRGGMPNRGN YNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY" BASE COUNT 855 a 572 c 806 g 613 t ORIGIN 1 aaaggaattg gcgccgttcg acaccaggcg gatccgctct gcagcacgaa cccatctcca 61 gccgcagccg cagccgccgc ccgggccgag gagcagccgc agcagccgcc accagtggcc 121 gagtgagcgg agccgagttt gaggcagcgc ctagcggtga atcggggccc tcaccatgag 181 ttcctcgcct gttaatgtaa aaaagctgaa ggtgtcggag ctgaaagagg agctcaagaa 241 gcgacgcctt tctgacaagg gtctcaaggc cgagctcatg gagcgactcc aggctgcgct 301 ggacgacgag gaggccgggg gccgccccgc catggagccc gggaacggca gcctagacct 361 gggcggggat tccgctgggc gctcgggagc aggcctcgag caggaggccg cggccggcgg 421 cgatgaagag gaggaggaag aggaagagga ggaggaagga atctccgctc tggacggcga 481 ccagatggag ctaggagagg agaacggcga cgatcagggt ttccaggaag gggaagatga 541 gctcggggac gaagaggaag gcgcgggcga cgagaacggg cacggggagc agcagcctca 601 accgccggcg acgcagcagc aacagcccca acagcagcgc ggggccgcca aggaggccgc 661 ggggaagagc agcggcccca cctcgctgtt cgcggtgacg gtggcgccgc ccggggcgag 721 gcagggccag cagcaggcgg gaggggacgg caaaacagaa cagaaaggcg gagataaaaa 781 gaggggtgtt aaaagaccac gagaagatca tggccgtgga tattttgagt acattgaaga 841 gaacaagtat agcagagcca aatctcctca gccacctgtt gaagaagaag atgaacactt 901 cgatgacaca gtggtttgtc ttgatactta taattgtgat ctacatttta aaatatcaag 961 agatcgtctc agtgcttctt cccttacaat ggagagtttt gcttttcttt gggctggagg 1021 aagagcatcc tatggtgtgt caaaaggcaa agtgtgtttt gagatgaagg ttacagagaa 1081 gatcccagta aggcatttat atacaaaaga tattgacata catgaagttc gtattggctg 1141 gtcactaact acaagtggaa tgttacttgg tgaagaagaa ttttcttatg ggtattctct 1201 aaaaggaata aaaacatgca actgtgagac tgaagattat ggagaaaagt ttgatgaaaa 1261 tgatgtgatt acatgttttg ctaactttga aagtgatgaa gtagaactct cgtatgctaa 1321 gaatggacaa gatcttggcg ttgccttcaa aatcagtaag gaagttcttg ctggacggcc 1381 actgttcccg catgttctct gccacaactg tgcagttgaa tttaattttg gtcagaagga 1441 aaagccatat tttccaatac ctgaagagta tactttcatc cagaacgtcc ccttagagga 1501 tcgagttaga ggaccaaagg ggcctgaaga gaagaaagat tgtgaagttg tgatgatgat 1561 tggcttgcca ggagctggaa aaactacctg ggttactaaa catgcagcag aaaatccagg 1621 gaaatataac attcttggca caaatactat tatggataag atgatggtgg caggttttaa 1681 gaagcaaatg gcagatactg gaaaactgaa cacactgttg cagagagccc cccagtgtct 1741 tgggaaattt attgagattg ctgcccgaaa gaagcgaaat tttattctgg atcagacaaa 1801 tgtgtctgct gctgcccaga ggagaaaaat gtgcctgttt gcaggcttcc agcgaaaagc 1861 tgttgtagtt tgcccaaaag atgaagacta taagcaaaga acacagaaga aagcagaagt 1921 agaggggaaa gacctaccag aacatgcggt cctcaaaatg aaaggaaact ttaccctccc 1981 agaggtagct gagtgctttg atgaaataac ctatgttgaa cttcagaagg aagaagccca 2041 aaaactcttg gagcaatata aggaagaaag caaaaaggct cttccaccag aaaagaaaca 2101 gaacactggc tcaaagaaaa gcaataaaaa taagagtggc aagaaccagt ttaacagagg 2161 tggtggccat agaggacgtg ggggattcaa tatgcgtggt ggaaatttca gaggaggagc 2221 ccctgggaat cgtggcggat ataataggag gggcaacatg ccacagagag gtggtggcgg 2281 tggaggaagt ggtggaatcg gctatccata ccctcgtgcc cctgtttttc ctggccgtgg 2341 tagttactca aacagaggga actacaacag aggtggaatg cccaacagag ggaactacaa 2401 ccagaacttc agaggacgag gaaacaatcg tggctacaaa aatcaatctc agggctacaa 2461 ccagtggcag cagggtcaat tctggggtca gaagccatgg agtcagcatt atcaccaagg 2521 atattattga atacccaaat aaaacgaact gatacatatt tctccaaaac cttcacaaga 2581 agtcgactgt tttctttagt aggctaactt tttaaacatt ccacaagagg aagtgcctgc 2641 gggttccttt tttagaagct ttgtgggttg attttttttc ttttcttttt tgtacatttt 2701 taattgcagt ttaaaagtga atcgtaagag aacctcagca ttgtgcacga taagagaatg 2761 tgtcagtatt tcagggttct acattttatc tgtaaaatgt gacttttttt tttttttatc 2821 acaacagaag taaaatgttg ctttgt //