LOCUS AK297085 1618 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ60672 complete cds, highly similar to Homo
sapiens CCR4-NOT transcription complex, subunit 10 (CNOT10), mRNA.
ACCESSION AK297085
VERSION AK297085.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1618)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1618
/clone="D9OST2003357"
/clone_lib="D9OST2"
/db_xref="H-InvDB:HIT000491709"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from CD34+ cells after 9-days ODF induction."
/note="primary culture, CD34+ cells"
/organism="Homo sapiens"
/tissue_type="cord blood"
CDS 192..1280
/codon_start=1
/note="highly similar to Homo sapiens CCR4-NOT
transcription complex, subunit 10 (CNOT10), mRNA"
/protein_id="BAH12492.1"
/transl_table=1
/translation="MDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFE
EKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMISQGNNNKNGKNETGNNNNKDGSN
HKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLKSNFE
YLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKK
ALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFE
CLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIV
LASQSIQNTVYNDGQSSAIPVAKAGKWG"
BASE COUNT 504 a 333 c 376 g 405 t
ORIGIN
1 cccactcctc tagccggaac ctgggggccc ggagccgggg taggcacaga gttgtcctcg
61 gaggtccagg acagcggcca gcccggcggc gggagtcagg gccacgccac ctgcagggaa
121 gaacccgagt cgaagcggga agatggctgc agacaagcct gcaggcgtga gtccactcag
181 ctgttgaaga aatggatgga ttagatgatg ttgaaaacag catgttgtac tataatcaag
241 cagtcattct ttatcatctg cggcagtata cagaagccat atcagttggt gaaaaacttt
301 atcagttcat agagcctttt gaagaaaaat ttgcccaagc agtgtgtttt ttgcttgtag
361 acctgtatat attaacctac caagctgaga aagctttgca tcttcttgct gtcctagaaa
421 aaatgatttc acagggtaac aataacaaaa atggaaagaa tgagactggt aataacaaca
481 acaaagatgg atctaatcat aaagctgaaa gtggagctct aatagaagct gcaaaatcaa
541 agatacatca gtacaaagta cgagcttata tccaaatgaa gtctctgaaa gcatgtaaaa
601 gggaaatcaa gtcagtcatg aatacagctg gaaattccgc accctctctc tttcttaaaa
661 gcaattttga gtacttaaga ggtaattatc gaaaagccgt gaagctatta aatagttcaa
721 acattgctga gcatccagga ttcatgaaaa caggtgaatg cttgagatgc atgttctgga
781 ataaccttgg ttgcatccat tttgccatga gcaagcacaa tttgggaata ttctacttta
841 aaaaggctct gcaagagaat gacaatgtct gtgcacagct cagtgcaggt agcactgatc
901 caggtaaaaa attttcagga agacccatgt gtacgttact aaccaataag agatatgagt
961 tgctgtataa ctgtggaatt cagcttcttc acattggaag gcctcttgct gccttcgaat
1021 gtctgattga agctgttcag gtttatcatg caaatcctcg cctctggcta cggctggctg
1081 aatgctgcat tgctgccaat aaggggactt ctgaacaaga aactaaaggc cttcccagca
1141 aaaaaggaat tgtacagtct attgttggtc aaggctatca tcgtaaaata gttttggcat
1201 cacagtctat acagaatact gtttataatg atgggcagtc ttcggccatt cctgtagcca
1261 aagcaggaaa atggggctaa aaatagtaat caattaggtg ggaacacaga gagcagcgaa
1321 agcagtgaaa cttgcagtaa aagccatgat ggagataaat tcattccagc tccaccttct
1381 tctccattga gaaaacagga attagaaaac ttaaagtgct ccatacttgc ttgcagtgcc
1441 tacgtggctc tggctttggg tgataacctc atggctttga atcatgcaga taaacttctt
1501 cagcagccca agctgtcagg atcagacaaa ggtgaaaatg aagcaatgga atcctctggt
1561 aagcgggccc ctcagtgcta ccccagttcc gtcaactctg ccaggactgt gatgctgt
//