LOCUS AK297070 2739 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56105 complete cds, highly similar to Nuclear
valosin-containing protein-like.
ACCESSION AK297070
VERSION AK297070.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2739)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2739
/clone="D9OST2001582"
/clone_lib="D9OST2"
/db_xref="H-InvDB:HIT000491694"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from CD34+ cells after 9-days ODF induction."
/note="primary culture, CD34+ cells"
/organism="Homo sapiens"
/tissue_type="cord blood"
CDS 22..2592
/codon_start=1
/note="highly similar to Nuclear valosin-containing
protein-like"
/protein_id="BAG59590.1"
/transl_table=1
/translation="MKPRPAGFVDNKLKQRVIQYLTSNKCGKYVDIGVLASDLQRVYS
IDYGRRKRNAFRIQVEKVFSIISSEKELKNLTELEDEHLAKRARQGEEDNEYTESYSD
DDSSMEDYPDPQSANHMNSSLLSLYRKGNPDSVSNTPEMEQRETTSSTPRISSKTGSI
PLKTPAKDSEGGWFIDKTPSVKKDSFFLDLSCEKSNPKKPITEIQDSKDSSLLESDMK
RKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKE
VCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEI
VSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCM
DDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRK
LRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLREQQKKNPEMEDLPS
KGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPS
AKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPP
GCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE
VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRL
DKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVR
EASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR
"
BASE COUNT 842 a 570 c 679 g 648 t
ORIGIN
1 gtggcttgaa agaccgacgc gatgaagccc agacctgcag ggttcgtgga taataaactc
61 aagcagcgag tcatccagta ccttaccagt aacaaatgtg gcaaatatgt ggacattgga
121 gtcttagcgt ctgatttaca aagagtgtac agtatagact atggtcgaag aaaaagaaat
181 gcttttagga ttcaggtaga aaaagtattt agcataatta gtagtgagaa ggaacttaag
241 aatttaacag aattagaaga tgaacatttg gcaaaaaggg caagacaagg tgaagaggat
301 aatgagtata ctgaaagcta ttctgatgat gattcaagta tggaagacta cccagatcca
361 cagtcagcaa atcacatgaa cagttccctg ctgtctttat atcggaaagg aaatcctgat
421 tctgtttcaa atactcctga gatggagcaa agagaaacca cctcttcaac accacgaata
481 agttccaaaa caggctccat tcccttgaag acccctgcca aagattctga aggaggatgg
541 tttattgaca aaaccccaag tgtaaagaaa gacagttttt tcttggacct gtcatgtgag
601 aaaagtaatc ctaagaagcc aataactgag atacaggatt caaaagattc ttctcttttg
661 gagagtgata tgaaacggaa aggcaagcta aagaataaag gaagcaaaag gaagaaagaa
721 gatcttcagg aagtagatgg agaaattgaa gctgtcctac aaaagaaagc taaagccagg
781 gggttagaat tccagatctc caacgtgaag tttgaagatg tgggaggcaa tgatatgaca
841 ttaaaagagg tctgcaagat gctcatacac atgcgtcacc cggaggtgta ccaccacctg
901 ggcgtcgtgc cccctcgtgg agttctcctt catggaccac caggctgtgg gaagacatta
961 cttgcacatg caattgctgg ggaacttgac ctgccaattt tgaaagtggc tgctccagag
1021 attgtgtctg gagtatccgg agagtctgag cagaagctga gagaactatt tgagcaagct
1081 gtgtcaaatg caccatgtat cattttcatt gatgaaattg atgctattac ccccaaaaga
1141 gaagtggctt caaaagatat ggaacgaaga attgtagccc aactcctaac ctgcatggat
1201 gatctgaata atgtggctgc tacagcccgg gtcctagtta ttggagctac taatcgacca
1261 gactcgttag accctgcttt gagacgtgcg ggaaggttcg accgagaaat atgcctaggt
1321 atcccagatg aagcatccag ggaaagaata cttcaaacat tgtgcagaaa actgaggctt
1381 cctcaagctt ttgatttctg tcacttagca cacctaactc caggctttgt tggtgctgat
1441 ctcatggcac tgtgccgaga ggcagcaatg tgtgcagtca atagagtctt aatgaagcta
1501 cgggaacagc agaagaaaaa tcctgaaatg gaagatttgc catctaaagg agtccaggag
1561 gaaaggctgg gaactgagcc cacttctgaa acacaggatg aattacaaag gctgctgggg
1621 ttgctaagag accaagatcc cctctcagag gagcagatgc aaggactgtg cattgaactg
1681 aatgatttca ttgttgctct atcctcagtc caaccctctg ccaaaaggga aggctttgtc
1741 actgtcccta atgtgacatg ggcagatatt ggtgccctgg aagacattag agaggagctc
1801 accatggcaa tattggcacc agtacgcaac ccagaccagt tcaaagctct tggattggtg
1861 actccagctg gggtcctcct tgctggtcct cctggctgtg ggaagactct gctggcgaag
1921 gctgttgcaa atgagtccgg actaaatttt atatctgtca agggccccga attactaaac
1981 atgtatgttg gtgagagtga acgtgctgtg cgacaagttt ttcaacgagc caagaactca
2041 gcaccctgtg tgatattctt tgatgaagtg gatgctttat gtcctcgaag atcagaccga
2101 gagacagggg caagtgtccg agtggtgaat cagctactta cagagatgga tggtctggaa
2161 gcacgccagc aggtttttat tatggcagcc actaacaggc cagatataat tgaccctgca
2221 atcctgcgcc cgggccgcct ggacaaaaca ctgtttgtgg gtttaccgcc ccctgcagat
2281 cgccttgcca tcttaaaaac tatcacaaaa aatggtacca aaccaccact ggatgcagat
2341 gtaaatttgg aagcaattgc tggtgacctt cgctgtgatt gctatacggg cgcagatctc
2401 tctgctttgg tacgagaagc ttctatctgt gccctgagac aggaaatggc aagacagaag
2461 agtggaaatg aaaaaggtga actcaaggtt agtcataagc attttgaaga agctttcaag
2521 aaagtaagat catctatatc aaaaaaggat caaatcatgt atgaacgttt gcaggagtcc
2581 ctcagccggt gatgtctcca gcagccggct tagaggagct agcccatcaa gccggcagag
2641 aatcccccac acgctctgaa ggacccactt tcagctggac acaggcgcgg cctcatgtaa
2701 acattttatt ttcaaatgaa tgaggccaag ctgaagctg
//