LOCUS AK297000 3044 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58151 complete cds, moderately similar to R3H
domain-containing protein 1.
ACCESSION AK297000
VERSION AK297000.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3044)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3044
/clone="CTONG3009584"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000491624"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 49..2514
/codon_start=1
/note="moderately similar to R3H domain-containing
protein 1"
/protein_id="BAG59538.1"
/transl_table=1
/translation="MTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKF
NEHIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDR
IFSQDSLCSQENYIIDKRLQDEDASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKY
SEPRPWSSTDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGQPFIN
PDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQQDNLGSQFSHMSLA
RQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPV
PTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSH
LNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYT
SVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSS
SVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSC
AHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLK
TVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRH
GNRGRRQAKKAASTDLGAGETVVGKVLEITELPDGITRMEAEKLFGELFKIGAKIRWL
RDPQSQPRRHPLCCGSGDNTANPERSKPSDLASTYTVLATFPSISAAQNALKKQINSV
NKFKLRTSKKHYDFHILERASSQ"
BASE COUNT 911 a 820 c 594 g 719 t
ORIGIN
1 ttagatttca ttggtaataa tgagtctcca cgtaaaaaat tccccccaat gacatcttac
61 cataggatgc tattacacag agtagccgct tactttggat tagaccacaa tgttgatcag
121 agtgggaagt ctgtcatagt aaacaaaact agcaatacaa gaatacctga tcagaaattt
181 aatgaacata ttaaggatga taaaggtgaa gactttcaga aacgttatat cctcaagaga
241 gataactcta gctttgacaa agatgataac cagatgagaa tacgtttgaa agatgacaga
301 agaagcaaat ctatagaaga aagagaagaa gagtaccaga gagccagaga ccgaatattt
361 tcccaagatt ccctgtgttc ccaagagaat tacattattg acaaaagact ccaagacgag
421 gatgccagta gtacccagca gaggcgccag atatttagag ttaataaaga tgcttcaggg
481 agatctacaa atagccatca aagcagcact gagaatgagt tgaagtactc ggaaccacga
541 ccctggagca gcacagattc agacagctct cttcgaaacc tgaaacctgc tgtaaccaaa
601 gccagcagct tcagtggaat ctcagtcctg acaagaggtg atagttctgg aagcagcaaa
661 agcataggca ggctttcaaa aacaggtcag cccttcataa acccagatgg gagtccagtt
721 gtgtataatc ctcctatgac tcaacaacca gttagatccc aagtgcctgg acctccacag
781 ccacctctgc cagccccacc tcaacaacca gcagctaatc acattttctc acagcaggat
841 aacctagggt ctcagtttag ccacatgagt cttgctcgcc agccatctgc tgatggttct
901 gaccctcatg ccgccatgtt ccagtccact gtggttcttc agtctccaca gcagtctggt
961 tatatcatga cagcagcccc tccaccacat cctcctccac cgccaccacc accacctcct
1021 cctcctcccc taccacctgg gcagccagtc cctactgctg gatatcctgc ctctggtcat
1081 cctgtcagcc agcctgtgct ccagcagcag ggatatattc agcagccatc accacagatg
1141 ccagcctgtt attgcgctcc aggccactat cactccagcc aacctcagta tcgcccagtc
1201 ccttctgttc attacaattc acatctaaac caaccactgc cacaacctgc gcagcagaca
1261 ggttatcaag ttatacccaa ccagcagcaa aactaccaag gaatagttgg agttcagcaa
1321 ccccagagtc agagcctagt cagtggccaa cccaacagca ttggaaatca gattcaagga
1381 gtggtcatcc cctatacttc agtgccaaca tatcaggttt cactgcctca aggttctcaa
1441 ggaattcccc atcagactta tcaacagcct gttatgttcc ctaatcagtc taatcaagga
1501 tctatgccca caacaggaat gcctgtttac tatagtgtca ttccacctgg tcaacaaaac
1561 aatttaagct cttcagtagg ttacctgcaa catccaggat cagaacaagt acaatttcct
1621 cgaaccactt caccatgcag ttcccagcag cttcaaggcc accaatgtac agctggacca
1681 ccaccgccac ctggtggggg gatggtgatg atgcagctca gtgtaccaaa caatccacaa
1741 tcttgtgccc actcaccccc gcagtggaaa caaaacaaat attactgtga tcaccagaga
1801 ggacagaagt gtgtagaatt tagcagtgta gacaatattg tccagcacag ccctcaactc
1861 agtagcccca ttatttcacc agctcagtcg ccagcaccag ctcagctgtc caccctgaaa
1921 actgtacgtc cctctggacc accactttcc atcatgcccc aattttctag accttttgtc
1981 cccgggcaag gagattccag gtatccatta cttggccagc cactgcagta caatcctcct
2041 gctgttctgc acggacacat tccaaaccaa cagggtcagc ctggcagcag gcatggaaac
2101 cgaggaagga gacaagctaa aaaagctgca tccacagacc ttggagcagg agaaacagtt
2161 gttgggaagg tcttggaaat tactgaacta ccagatggaa taactcgcat ggaagctgaa
2221 aagctttttg gggaactctt taaaattggc gccaagatcc ggtggctccg ggacccccag
2281 tcccaaccac gtcgtcaccc cctctgctgt ggcagtgggg acaacactgc caaccctgaa
2341 cgctctaaac ccagtgactt ggcctccacc tacaccgtct tagccacatt cccctccatt
2401 tcagctgcac agaatgcact gaagaaacaa attaactcag ttaacaagtt taagctgaga
2461 acaagcaaga agcactatga ctttcacatt ttggaaaggg caagttctca gtaacagcca
2521 cctttggacc cttcgccttt atggttcccc tgccctctcc catctttgat tggcttggta
2581 tttggagctt ctgttaacat tatagagact cctaggatgt gtgttcatgg cattatagct
2641 tttgaagaaa ggccagtgat ccagcaaagg gggaaaaata tgcatttcac cccacatgac
2701 taggaatcca catcagaatg atacagagtt agcaggtttt tctaaggaaa tgccattcaa
2761 atgcctccta acttttatag ttattttgtt ttatatttct aaattcttgt atcagatcca
2821 aagctctatt gtacagcaaa ttattcttca aaatgattat aaccagttgc accctgtatt
2881 tctttttgca gccagcacaa tgtgacccaa cttaaaattt gggggaaaaa gaatgcagga
2941 gtgaaataac caagtcaaaa ccatgtacta tctccttggg ggttagggat gctaagaaga
3001 gcccacaaat agaggattac tcttcccctg aatctctaaa ctca
//