LOCUS AK296991 1213 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58019 complete cds, highly similar to
Actin-related protein 6.
ACCESSION AK296991
VERSION AK296991.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1213)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1213
/clone="CTONG3008082"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000491615"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 37..588
/codon_start=1
/note="highly similar to Actin-related protein 6"
/protein_id="BAG59531.1"
/transl_table=1
/translation="MTTLVLDNGAYNAKIGYSHENVSVIPNCQFRSKTARLKTFTANQ
IDEIKDPSGLFYILPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNF
TSIQESMNEILFEEYQFQAVLRVNGEFKFSLKLSYMTMDMNRVILIKSQNIKWHSWLA
QWLTPVTPSVWEAEASRSLEFRI"
BASE COUNT 337 a 232 c 284 g 360 t
ORIGIN
1 aaaaacaact acggctgcgg tgtggttggt ggtgagatga cgaccttagt gctggataat
61 ggagcttaca acgccaaaat cggttacagc catgaaaatg tgtcggttat tcctaattgt
121 cagttccggt caaaaacagc acgtcttaaa acttttactg ccaaccagat agatgaaata
181 aaagaccctt ctggactctt ttacatcctc ccttttcaaa agggctactt ggtgaattgg
241 gatgttcaga gacaagtttg ggattacctt tttggaaaag aaatgtatca ggttgatttt
301 ttagatacta atattattat cactgaacca tactttaact tcacttcaat tcaagaatca
361 atgaatgaaa ttctatttga agaataccag tttcaagcag tattaagagt aaatggtgag
421 ttcaagtttt cactgaaatt gagttatatg actatggata tgaatagggt aatactcata
481 aagtcccaaa atattaagtg gcattcttgg ctagcacagt ggctaacgcc tgtaacccca
541 tcagtttggg aggctgaggc gagtagatca cttgagttta ggatttgaga tcagcctggg
601 cagcatggtg aaaccctgtc tctgcaaaaa aatggaaaaa ttagttgggc atggtgacac
661 gcacctgtag tcccagctac ttgggaggct gaggcagaag gatcgtttga gcctgggagg
721 ttgaagccgc agtgagctat gatcgtgcca gcctgggtga cagagtgaga tcctgtctcc
781 aaaaaaaaaa gaaattgaat tctgtgaagc ttgaatatgg atatgaacca agtaaagaaa
841 ctcttaaagt tccagaatac tatgtggcat tttttagatt tgaaggaaat aagtcttgga
901 tttttctttt tctttttttt ttttccgaga tggggttctg gtcttgttgc ccaggttggc
961 atgtgatgga gcaatctctg ctcaccctcc acctcctggg ttcaagcgat tctcctgcct
1021 cagcctccca ggtagctggg attacaggcg ttcgccacca tgcctggcta attttgtatt
1081 tttagtagag atggagtttg accatgttgg tcaggctggt cttgaactcc tgatctcagg
1141 tgatccaccc gccttgccct cccaaaatgc tgggattaca ggcatgagcc actgcgcaag
1201 ttttggaatc tta
//