LOCUS AK296971 3263 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ52325 complete cds.
ACCESSION AK296971
VERSION AK296971.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3263)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3263
/clone="CTONG3005810"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000491595"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 899..2905
/codon_start=1
/protein_id="BAH12465.1"
/transl_table=1
/translation="MSKLAAAHRGAIRALQMFVTQFTDRGEHPLPARCKELGSLIRQL
SLCSVKLDADPSVPDVVIDILQQIEALESLLEKKLSPKKVKKCFSEIRSRFPIGSQKA
LERWPSTSPKGERRPLTAKDTFPQETSRPSVAKQLLADKYQPDTELPETQRLQSELDV
LDADIVLEEGPFILDQSASFKDEVLAVAKTKAGKKKPVTENVPFRKKDTLAPARQQGL
RKAERGRQSQPHSKSRVQQTTVSSRLKMNRQPVKDRKAPWIPPNPTSPPASPKCAAWL
KVKTSPRDATKEPLQQEDPQEESHLTGAVEHEAARLAWLDAETSKRLKELEELKAKEI
DSMQKQRLDWLDAETSRRTKELNELKAEEMYRLQQLSVSATHLADKVEEAVLDRLKPL
LVKAQRVNSTTEANIHLKDGSSVNTAKAQPAQEVAAVDFESNNIRQLDDFLEDCASEL
WAVTHAKILGSETLATVEDSKDSPDLEIMMRRMEEMEKYQESVRQRYNKIAYADPRLW
MQEENNDQKISAISEKPLSPHPIRITKTVDRKDPAVNIMLERPCNGNSLDESVGTEEG
SEKREAPLLSLAEDSQQKEGRAPLFVPPGMQHSIGDYCSRFEQYLRIISHEAVGSFNP
WLIAESFSEELVDEALGAVAAELQDMCEDYAEAVFTSEFLEAAT"
BASE COUNT 997 a 746 c 779 g 741 t
ORIGIN
1 aggcggccgg aagcgcggcc ttgttggggg cccccgttgc ccgcctccca gtagccgcgc
61 ctcaccctag gccagaacca gctgcagttt aataggaatg ttcctacaca ttcaagcaac
121 ttggcgatcc gatattcttg cccacatgcc attagaattg aaaaactgaa gcactcatac
181 aatgaatcat accattgtaa agatgcagat tgtagagttg gtcctgacct gggcagttct
241 gtttcatttt ccgtcatatc ccaagagaga cttagctatg ctgtccacct agccagaaga
301 gatgtgaaac gaagacaatt tgaaaaacat ataaaagaac atcatctcag aagtcagcct
361 caaagctctc agaagtgtgg acatactaag tataaaatac ccgaccacag ggtggaaagg
421 aaggaatcaa agagtcaagc agcctgtcag tgtagccacc agccatccaa agtagaaatc
481 tccagctctg gtgccaaagt atacctttac tcatctcatc caggccagtc agatcttact
541 gtgccaaatt cgccacccac ccatgatccg ggacttcagc ctcatcccag gataggtgac
601 cacaaaaaca taagtgaaca gaaaagcctg ctagaagtcc agcgactcca gaaagaactg
661 agcagttgta tccacaaaat tgaagaggta actaaaaaag atagactaga agaagctttg
721 aatccagatg aagaacgtcg aatccgtatc aggagacagg agcaagctgc tcgctctgcc
781 cgaatgctct acgtcctcca gcagcagtga cttgaattaa taatggttat atttggacaa
841 gaggagatat atcgatgcat ccttttctac aaaaaagatc aatggaaagt catgggcgat
901 gtctaagctg gcggctgccc atcgaggagc cattcgggcc ttacagatgt ttgtcactca
961 gtttactgac cgaggggagc atccacttcc tgctcggtgt aaggaactgg gcagccttat
1021 tcgccagctt tcactttgtt ctgtcaagct ggatgcagac ccttctgttc ctgatgtggt
1081 tatagatatt ctgcaacaaa ttgaggcttt ggaatctctc ctggaaaaga aactgtcacc
1141 aaaaaaggtg aaaaaatgtt tcagtgaaat tcggagcaga tttcctatcg gtagccaaaa
1201 ggccttggag agatggccaa gtacatcacc aaagggtgag aggaggcccc tcacagcaaa
1261 ggacacattc ccacaggaaa caagtcgacc ttctgtagca aagcagcttc ttgccgataa
1321 gtatcagccc gatacggagc ttccggagac ccagaggttg cagagtgagc ttgatgtatt
1381 agatgcggat atagttctgg aagaaggacc atttattcta gaccaaagtg caagcttcaa
1441 agacgaggtg ttagccgtgg caaaaacaaa agcagggaaa aagaagcctg tgactgagaa
1501 tgtgccgttt aggaagaaag atactctggc gccagcaaga cagcaaggac tccgcaaagc
1561 tgaaagaggt agacaaagcc aacctcacag taaaagcaga gtgcagcaga caacagtttc
1621 atccagatta aaaatgaacc ggcagcctgt gaaagaccgc aaggcaccat ggataccccc
1681 aaaccccaca tccccaccag cgtctcctaa atgtgctgca tggctaaagg tgaaaactag
1741 ccccagagat gccacaaaag agcctctcca gcaagaagat cctcaagagg aaagtcacct
1801 gacaggtgct gttgagcatg aagcagccag gctcgcttgg cttgatgctg aaacttccaa
1861 aagattgaag gaactagaag agttaaaagc caaggaaatt gacagcatgc aaaaacagag
1921 gcttgattgg cttgatgctg aaacttctag aagaacaaag gaactgaatg agctcaaagc
1981 tgaagaaatg tatagactcc aacaattgag tgtttctgcc acccacttag cagacaaggt
2041 agaggaggca gttctggatc gtttgaagcc tctcttggtc aaggcccaga gagtcaattc
2101 tactacagaa gcaaatattc atttgaaaga tggctcgtca gtaaacacag cgaaagccca
2161 gcctgcacag gaggttgcag ctgttgattt tgaatccaac aacattcgtc agcttgatga
2221 ttttttggaa gattgtgcca gtgagctctg ggctgtgact catgctaaga tcttggggtc
2281 tgaaacctta gccaccgttg aggacagcaa ggatagccca gatctggaga tcatgatgcg
2341 ccgaatggaa gagatggaaa aataccagga gtctgttcgt caaagatata ataaaatcgc
2401 atatgctgat cctcgacttt ggatgcagga agaaaacaat gaccaaaaaa tctcagcaat
2461 aagtgaaaag cctctatctc ctcatccaat cagaatcacg aagacagtgg atcgcaagga
2521 tccagccgtg aacatcatgt tagaaaggcc ctgtaatggc aattccctgg atgaaagtgt
2581 gggaacagag gaaggatcag agaaaagaga ggcccctctt ctctccctag ccgaagattc
2641 tcaacagaaa gaaggccgag ctcccctctt tgtcccaccg ggtatgcagc acagcatcgg
2701 tgactactgt agtcgttttg agcagtacct tcggatcata tctcatgagg ctgtaggctc
2761 cttcaacccg tggctgatag ctgaaagctt ttcagaagag ctggtagatg aagctctggg
2821 tgctgtggct gctgaacttc aggatatgtg cgaagattat gcagaagctg tgttcacctc
2881 agaattctta gaggctgcta cataaaggct ctctgaggcg aggccatttg tgtcacactg
2941 gagaagggat ggcaccaccc tttgttttgg cccacaggaa attttcatcc tcagctgtcc
3001 atccaggccc agaaggtgct gcccactgaa aggaaggcag tgccggggag gtcatcctca
3061 ctttgcattt tcttttgtca tggcaatggt tctggaaatg tatgatgcaa tgtatcacac
3121 ttatcagtgc ccaggcaaca caacttgatt atggcaatat tttcagaatg tgtacttttc
3181 ctattgaaat accatgttca ttcctctggc tcagtttggt gatgaaaatg ttttgaaaga
3241 taatcgatac gtatatttca cac
//