LOCUS AK296970 3667 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57526 complete cds.
ACCESSION AK296970
VERSION AK296970.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3667)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3667
/clone="CTONG3005694"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000491594"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 282..3317
/codon_start=1
/protein_id="BAG59514.1"
/transl_table=1
/translation="MLLVIDQKIEGEVRERMLVSYYRYSAARSSADSNMDDICKLLRS
TGYSSQPGAKRPSNYPESYFQRVPINESFISMVIGRLRSDDIYNQVSAYPLPEHRSTA
LANQAAMLYVILYFEPSILHTHQAKMRETVDKYFPDNWVISIYMGITVNLVDAWEPYK
AAKTALNNTLDLSNVREQASRYATVSERVHAQVQQFLKEGYLREEMVLDNIPKLLNCL
RDCNVAIRWLMLHTADSACDPNNKRLRQIKDQILTDSRYNPRILFQLLLDTAQFEFIL
KEMFKQMLSEKQTKWEHYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREISKQ
ILSLNYDDSTATGRKTVQLIQALEEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSFAWQLIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLL
RINQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSLLKIIKLQTHDIIEVPTRL
DKDKLRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKEL
VKRVAFALHRGLIFNPRAKPSELMPKLKELGATMDGFHRSFEYIQDYVNIYGLKIWQE
EVSRIINYNVEQECNNFLRTKIQDWQSMYQSTHIPIPKFTPVDESVTFIGRLCREILR
ITDPKMTCHIDQLNTWYDMKTHQEVTSSRLFSEIQTTLGTFGLNGLDRLLCFMIVKEL
QNFLSMFQKIILRDRTVQDTLKTLMNAVSPLKSIVANSNKIYFSAIAKTQKIWTAYLE
AIMKVGQMQILRQQIANELNYSCRFDSKHLAAALENLNKALLADIEAHYQDPSLPYPK
EDNTLLYEITAYLEAAGIHNPLNKIYITTKRLPYFPIVNFLFLIAQLPKLQYNKNLGM
VCRKPTDPVDWPPLVLGLLTLLKQFHSRYTEQFLALIGQFICSTVEQCTSQKIPEIPA
DVVGALLFLEDYVRYTKLPRRVAEAHVPNFIFDEFRTVL"
BASE COUNT 1088 a 804 c 786 g 989 t
ORIGIN
1 atgtgaccgc ctggggagtc aggggcggaa gtcggggtct gacccgctcc aggtccggga
61 ctgcggatag aagaggaccg ccgccttgag ggaggggtgg aaactgggtg ccggctccgc
121 gcgcgacctc cggccctgcg cgtgcgccgt ggcgcggccc ggctgacaga tatctagatg
181 atctcaatga aggggtttat attcagcaaa ccttagaaac tgtgcttctc aatgaagatg
241 gaaaacaact tctatgtgaa gcactgtact tatatggagt tatgctactg gtcattgacc
301 aaaagattga aggagaagtc agagagagga tgctggtttc ttactaccga tacagtgctg
361 ctcgatcttc tgctgattca aatatggacg atatttgtaa gctgcttcga agtacaggtt
421 attctagcca accaggtgcc aaaagaccat ccaactatcc cgagagctat ttccagagag
481 tgcctatcaa cgaatccttc atcagtatgg tcattggtcg actgagatct gatgatattt
541 acaaccaggt ctcagcgtat cctttgccgg agcatcgcag cacagccctg gcaaaccaag
601 ctgccatgct gtacgtgatt ctctactttg agccttccat ccttcacacc catcaagcaa
661 aaatgagaga gacagtggat aaatactttc cagataattg ggtaattagt atttacatgg
721 ggatcacagt taatctagta gatgcttggg aaccttacaa agctgcaaaa actgctttaa
781 ataataccct ggacctttca aatgtcagag aacaggcaag cagatatgct actgtcagtg
841 aaagagtgca tgctcaagtg cagcaatttc taaaagaagg ttatttaagg gaggagatgg
901 ttctggacaa tatcccaaag cttctgaact gcctgagaga ctgcaatgtt gccatccgat
961 ggctgatgct tcatacagca gactcagcct gtgacccaaa caacaaacgc cttcgtcaaa
1021 tcaaggacca gattctaaca gactctcggt acaatcccag gatcctcttc cagctgctgt
1081 tagatactgc acaatttgag tttatactca aagagatgtt caagcaaatg ctttcagaaa
1141 agcaaaccaa atgggagcat tacaagaaag agggttcgga gcggatgact gagcttgctg
1201 atgtcttttc aggagtgaaa cccctaacca gagtggagaa aaatgaaaac cttcaagctt
1261 ggttcagaga gatctcaaaa caaatattgt ctttaaatta tgatgattct actgctacgg
1321 gcagaaaaac tgtacaactg atacaagctt tggaagaggt tcaagaattc caccagttgg
1381 aatccaatct gcaagtatgt cagtttcttg ccgatactcg aaagtttctt catcaaatga
1441 tcagaaccat taacattaaa gaggaggttc tgatcacaat gcagatcgtt ggggaccttt
1501 ctttcgcttg gcagttgatt gacagtttca catccatcat gcaagaaagc ataagggtaa
1561 atccatccat ggttactaaa ctcagagcta ccttcctaaa gcttgcctct gccctcgatc
1621 tgccccttct tcgtattaat caggcaaata gccccgacct gctcagcgtg tcacagtact
1681 attctggaga gttggtatcc tatgtgagaa aagttttgca gatcatccca gaaagcatgt
1741 ttacatctct tctaaagatc ataaagcttc agacccacga cattattgaa gtgcctaccc
1801 gcctggacaa agacaagctg agggactatg ctcagctagg cccacgatac gaggttgcca
1861 agcttactca tgctatttcc atttttactg aaggcatctt aatgatgaaa acgactttgg
1921 ttggcatcat caaggtggat ccaaagcagt tgctggaaga tggaataagg aaagagcttg
1981 tgaagcgcgt tgcctttgcc ctgcataggg gactgatatt caaccctcga gccaagccaa
2041 gtgaattgat gcccaagctg aaagagttgg gagcgaccat ggatggattc catcgttctt
2101 ttgaatacat acaggactat gtcaacattt atggtctgaa gatttggcag gaagaagtat
2161 ctcgtatcat aaattacaac gtggagcaag agtgtaataa ctttctaaga acgaagattc
2221 aagattggca aagcatgtac cagtccactc atattccaat acccaagttt acccctgtgg
2281 atgagtctgt aacgtttatt ggtcgactct gcagagaaat cctgcggatc acagacccaa
2341 aaatgacatg tcacatagac cagctgaaca cttggtatga tatgaaaact catcaggaag
2401 tgaccagcag ccgcctcttc tcagaaatcc agaccacctt gggaaccttt ggtctaaatg
2461 gcttagacag gcttctgtgc tttatgattg taaaagagtt acagaatttc ctcagtatgt
2521 ttcagaaaat tatcctgaga gacagaactg ttcaggacac tttaaaaacc ctcatgaatg
2581 ctgtcagtcc cctaaaaagt attgtcgcaa attcaaataa aatttatttt tccgccattg
2641 ccaaaacaca gaagatttgg actgcgtatc tcgaggctat aatgaaggtt gggcagatgc
2701 agattctgag acaacagatt gccaatgaat taaattattc ttgtcggttt gattctaaac
2761 atctggcagc tgctctggag aatctcaata aggctctcct agcagacatt gaagcccact
2821 atcaggaccc ttcacttcct taccccaaag aagataacac acttttatat gaaatcacag
2881 cctatctgga ggcagctggc attcacaacc cactgaataa gatatacata acaacaaagc
2941 gcttacccta ttttccaatt gtaaactttc tatttttgat cgctcagttg ccaaaacttc
3001 aatacaacaa aaatctggga atggtctgcc gaaaaccgac cgacccggtt gattggccac
3061 cacttgtcct gggactgctc actctgctga agcagttcca ttcccggtac accgagcagt
3121 tcctggcgct gattggccag tttatctgct ccacggtgga gcagtgtaca agccagaaga
3181 tacctgaaat tcctgcagat gttgtgggtg cccttctgtt cctggaggat tatgttcggt
3241 acacaaagct acccaggagg gttgctgaag cacatgtgcc taatttcatt tttgatgagt
3301 tcagaacagt gctgtaactg tttttcctac ttcttcaatg gaaggattgt ccttagatct
3361 tcccaccatc acaaatgaat ttgaagatga aaagaaactc agttgctcat acaactgcat
3421 tttttctgtc tattatggga aacatcagac gttctgagta agatatatct catggcatta
3481 gttaatataa ctgatattgt ttaaatcatg gtattacatg caatttatat cagataaaag
3541 cagaacacat ttttgtactg cctctcttaa atgctgaatg taactgttat gtataaatcc
3601 atttagtttt atgttctaaa gaactatttg tgcaactcca gattttcagt aaaatagtat
3661 tactagt
//