LOCUS AK296966 4261 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60082 partial cds, weakly similar to
Uro-adherence factor A precursor.
ACCESSION AK296966
VERSION AK296966.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4261)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4261
/clone="CTONG3005404"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000491590"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 168..>4261
/codon_start=1
/note="weakly similar to Uro-adherence factor A precursor"
/protein_id="BAG59510.1"
/transl_table=1
/translation="MSSGRRRGSAPWHSFSRFFAPRSPSRDKEEEEEERPGTSPPPAP
GRSAASVENEPMSTSQKKENVLSSEAVKIRQSEDKRNHAEKPVTLPVQEDPKKAYDLS
SSTSDTKIGESDRQPKESFFQFLGNLFNISGKSSLGEAKQSSFKDDQDKTEKDLQNPS
DHHEDGIKREREIFSGSLRTQTHPTEEQDSNSSELSDAFSLDTTQDSDQETTNLLKQI
DGKPEKPSVTYATYRGPRHIGKYLKQQTGLATVNTLDRENESSDSSTNRHIDPGSEIE
AGVLPLLLSASTDSSMKGNLLEGPLEDSDCSKTSFNKENSLTNNPELQNIASSNNLLN
KNAWGSIERNRSSPSSVTNSSYDGESDSQHHLSCEPVSQTNRNLVCSALLTGSNHRKV
PCSPDFQRVTTTENTIKENSTVMSNRTLVQREELVEPQGPAISDFSCSKSDGSDTTEQ
ESTNLPSPNKSIRHEHLQLPESECSDKQTIDSSSKQAATHTNIIALQRHAVTDTEFVN
EGKRLSAQDSQKNVAVREIRRETESASAGESIASSHVKAPEDKIESLPKDTDQYFETK
AKKLDFRSHDKIPHIRMNKKDLASLNYISESAVVASLGNENAPELKFELNRSHISETP
LDSESPQQAEVSPDAKTSLSLDCKKLNFSISPPTFVSGVGMLSKLDIPDLMNEGSPVP
IETGNVNIVGISYQPRKCKEENVKNHVEAAGRKSPPPSFCLEYTSAIFEFKEVLSNSE
KCQVLPGSEASGPHLTGLELLSFDSGNLSKDCSSILSQDPNRVELVSSNTKANMSIIE
KSDSLSLEAKTANIVSKAEIDGQNNVLVESHSGRGKTISLSKVSLSKVEPRNISQDKM
SSFPLKITHVPEKPILSELTFLEVEQGKRFQSINHNEIGEKCSDAGLKENCQAELSPA
ASKYEDKPEPEVDALGSPPALLKSNISWILPPIHDEKISRQMAQNCEAHTCVFHQSLD
ICGTKKISGHSEMAELSLTNISPKFQETGSMKVNSPFLDSDSSLEKNSSASEDSSFLK
VPSVLKLEKKSSSYRKKENIHFLNGGIDSVSSSSSYPEEVSMIVNSHKPQNNLDSIQV
TKDLTHEGTSVTNLLYPTTSYLEFETSVSIGTEVTPFQEHFGIYTGKISIDFPTAAQF
DNLVEAETGAVAGPAASVNSSGQQCSEASAEHIEARRRAHDQLLDLKSSLLKKADTLI
GEIFNSVREELKFKHTVSTCQEHIAIEGIMNLGTLKEDISEKNPSEVTLTEIQQTEGL
EEQGMENMSEVKEKPCVSPTVGEKNLLVDPNSMNVSCLLEDKARELVNEIIYVAQEKL
RNDTFEDTEDTWDSELQANTSKILNSDSVKPHDVVREFLVSEQPV"
BASE COUNT 1385 a 884 c 901 g 1091 t
ORIGIN
1 gtcgcgtccg cacttctcct gcccgagaga gactgagccg cgctggcagc tcgcgtcgag
61 tcggtctgcc ctagccgcat cccgcggcgc ccggtcgggc tccgggcacc aggcaacacc
121 taggccgttc ccttcagaca gccccgggcc agcggccccc tcgggaaatg tccagcggcc
181 gcagaagggg cagcgccccc tggcacagct tctcccggtt cttcgctccc cgaagtcctt
241 cccgggacaa ggaagaggaa gaggaggaga ggccggggac gagcccgcct ccagctccag
301 gccggtccgc tgccagtgtt gaaaatgagc ccatgagcac aagtcagaaa aaggaaaatg
361 tactttcatc agaagcagta aagattcgcc aaagtgagga caaaaggaac catgctgaga
421 agccagtcac tcttccagtg caggaagatc ccaaaaaggc atatgatctt tccagttcca
481 cttcagatac caaaatagga gaaagtgaca gacagccaaa agaaagcttt tttcagtttc
541 ttggtaactt attcaatatc tcggggaaat catctctagg tgaagctaag cagtcttctt
601 tcaaagatga ccaggataaa actgagaagg atttacaaaa tcccagtgac catcatgaag
661 acgggatcaa aagggagaga gagattttca gtggctccct aagaacccag acacatccaa
721 cagaagaaca agactctaac tcatccgaac tctcagatgc tttttctttg gatacaacac
781 aagacagtga ccaagaaacc actaatttgc taaaacaaat cgatggtaaa ccagagaagc
841 cttcagtaac atatgcaaca tatcgaggcc caagacacat tgggaaatat ttaaagcaac
901 agacaggctt ggcaactgtg aataccttgg acagagaaaa tgaaagttct gactctagta
961 caaacagaca cattgaccct ggaagtgaga ttgaggctgg ggtactgcca ctgttgttat
1021 cagctagtac agactcatct atgaaaggaa atctacttga aggcccatta gaagactctg
1081 attgtagcaa aacaagtttc aacaaggaaa attctttgac aaataaccca gaactgcaga
1141 atattgcctc ttccaataat cttttaaata aaaatgcttg ggggagtatt gagagaaata
1201 ggtcatcccc ttcttctgtg actaactcca gctacgatgg agaatctgac tcacagcacc
1261 atttaagttg tgaaccggtt tctcagacta acagaaattt ggtatgttca gcattgttaa
1321 caggaagtaa ccatcgcaaa gtcccttgca gcccagattt tcagagagta actacaacag
1381 aaaatacgat aaaagaaaac agcactgtga tgagtaatag gacattggtg caaagagagg
1441 agcttgttga gcctcagggc cctgctattt ctgatttctc ttgtagtaaa tctgatggga
1501 gtgacactac tgagcaggaa agtacaaatt tgccaagtcc aaataaatca attaggcatg
1561 aacatctgca gttgccagag agtgagtgtt ctgacaagca aaccatagat agctcatcaa
1621 agcaagctgc cactcacacc aatatcattg ctcttcagag acatgctgtg acagacacag
1681 aatttgtaaa tgaaggaaag agattgtctg cccaagactc acagaaaaat gtggctgtta
1741 gagaaatcag gcgagaaaca gaaagtgcct cagctggtga atccatagct tcaagtcatg
1801 taaaagctcc agaagataaa attgagtcat tacccaaaga tactgaccaa tactttgaaa
1861 ccaaagccaa aaagcttgat tttaggtcac atgataaaat tcctcatatt agaatgaata
1921 aaaaagacct ggcctcttta aattacatca gtgaatcagc agttgtagca agcttaggaa
1981 atgaaaatgc acctgagttg aaatttgaac ttaatagaag tcacatttca gaaactcctc
2041 ttgactctga gagtcctcaa caagctgaag tatcacctga tgctaaaaca tctcttagcc
2101 ttgactgtaa aaaactaaat ttcagtattt cacctcctac ctttgtttct ggagttggga
2161 tgctgagcaa gttggatatt cctgatttaa tgaatgaggg ttctcctgtg cccattgaaa
2221 ctgggaatgt caacattgtt ggtatttcct atcagcctag gaagtgtaaa gaagaaaatg
2281 tgaaaaacca tgttgaggct gcaggcagga agagtcctcc tccttccttt tgccttgaat
2341 atacatctgc aatttttgaa ttcaaagaag ttctttctaa tagtgaaaaa tgccaggttc
2401 ttccaggttc tgaagccagt ggccctcact taactgggtt ggagctattg agctttgact
2461 ctggaaacct ctctaaggat tgcagttcca ttttatctca agaccctaat agagtagagt
2521 tagtgtcttc aaacactaaa gcaaatatga gcataataga gaagtctgat tctctttcct
2581 tggaagccaa aactgctaac attgtatcaa aagctgaaat tgatggtcag aacaatgttc
2641 ttgtggagtc acattctgga agaggaaaaa ctatatcctt gtccaaggta tctctttcaa
2701 aagtggagcc cagaaacatt tctcaggata aaatgtcttc ttttccattg aaaattaccc
2761 atgttccaga aaagcctatt ttgtcagaat taacctttct agaagttgaa cagggcaaac
2821 gttttcaatc aattaatcat aatgagatag gagagaaatg ttcagatgct ggccttaaag
2881 agaattgcca agctgagctt tctcctgctg cctccaaata tgaagataag ccagaaccag
2941 aggtagatgc cttaggctct cctcctgctc ttcttaaaag taatatatct tggattttac
3001 cacctattca tgatgaaaaa atcagtaggc aaatggcgca gaattgtgaa gctcacactt
3061 gtgtgtttca tcaatctttg gatatttgtg ggactaaaaa gatttctggt cactcagaaa
3121 tggcggaact cagcttaact aatatttccc ctaaattcca agaaactggc agcatgaaag
3181 taaattcacc ttttctggat tctgattcca gtttggaaaa aaattcttct gcatctgagg
3241 actcaagctt ccttaaagta ccttctgtgc tgaaattgga aaagaaatcc tcatcttaca
3301 gaaagaaaga gaacatccat tttttaaatg gtggtattga tagtgtgtca tcttcctcta
3361 gttaccctga agaagttagc atgatagtaa attcacataa gccccaaaat aatttggatt
3421 ctatacaagt taccaaagat ctcacacatg aaggtacctc tgtaactaac ctgttgtacc
3481 ctactacctc ttatttggaa tttgaaacgt ctgtctcaat tgggacagaa gtaaccccat
3541 ttcaggaaca ttttgggatt tatactggga agatatccat tgatttccca actgctgccc
3601 aatttgacaa tctcgtggaa gcagagactg gagcagttgc tgggcctgca gcgtcagtta
3661 acagctcagg ccaacagtgt tctgaagcct ctgctgagca catagaagcc aggagaagag
3721 cacatgacca acttttggac ctcaaaagta gtttactcaa aaaggccgat acattgattg
3781 gtgagatttt taattctgtc agggaagaac taaaattcaa acacacagtg agtacctgcc
3841 aggagcatat agccatagaa ggtataatga atctgggtac cctgaaagaa gacatctctg
3901 agaaaaaccc atcagaagtg acactaacag aaatacaaca gacagagggt ttggaagagc
3961 aaggcatgga aaacatgtca gaagtcaaag agaagccctg tgtttcacca acagttggtg
4021 agaagaatct tcttgttgat cctaatagta tgaatgtatc ttgtttgtta gaagataaag
4081 ctagggaatt agtcaatgag attatttatg tagcccaaga aaaattgaga aatgatactt
4141 ttgaagatac tgaggatact tgggattctg aacttcaggc taatacttca aaaattctga
4201 acagtgatag tgttaagcca catgatgtag ttagagagtt cttggtttca gaacagccag
4261 t
//