LOCUS AK296942 1961 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58580 complete cds, highly similar to Homo
sapiens zinc finger protein 211 (ZNF211), transcript variant 2,
mRNA.
ACCESSION AK296942
VERSION AK296942.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1961)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1961
/clone="CTONG3002290"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000491566"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 196..1863
/codon_start=1
/note="highly similar to Homo sapiens zinc finger protein
211 (ZNF211), transcript variant 2, mRNA"
/protein_id="BAG59491.1"
/transl_table=1
/translation="MLENFALTSSLGLISSWSHVVAQLGLGEVPSVLHRMFMTPASAR
WDQRGPGLHEWHLGKGMSSGCWCGVEHEETPSEQRISGERVPQFRTSKEGSSSQNADS
CEICCLVLRDILHLAEHQGTNCGQKLHTCGKQFYISANLQQHQRQHITEAPFRSYVDT
ASFTQSCIVHVSEKPFTCREIRKDFLANMRFLHQDATQTGEKPNNSNKCAVAFYSGKS
HHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRRCNLIQHLKVHSEERPY
ECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLNSHRKVHTGERPYEC
GECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQRVHTGERPHECNE
CGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTGERPYVCGECG
KSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYECSECGKS
FSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHIGEKP"
BASE COUNT 580 a 433 c 472 g 476 t
ORIGIN
1 cttcttcgca gcggtcattt tggctgccct cccggaggtc cgttctgtct gtcagccgct
61 ttggttccca tagctacaga ggtgcttttc aaacttacac agggaagtgt gacctttgaa
121 gatgtggccg tgtacttctc ctgggaggaa tgggatctcc ttgatgaggc tcagaaacac
181 ctgtacttcg atgtgatgct ggagaacttt gcacttacgt cctccctggg acttatatca
241 tcctggtctc atgtagttgc tcaactaggg ctaggggaag tgccctctgt tcttcacagg
301 atgttcatga ctccagcctc agcaagatgg gatcagagag ggcctggcct acatgaatgg
361 cacttgggaa aaggcatgtc atcaggttgt tggtgtggag tggaacatga ggaaacacct
421 tctgaacaga gaatttctgg agaaagagtg ccacagttca ggacttccaa agaaggttca
481 tcttcccaga atgccgactc ctgtgaaata tgttgcctgg tcttgagaga tattttgcac
541 ttggctgaac accaaggaac aaactgcggg cagaaactac acacatgtgg aaaacaattc
601 tacatcagtg caaatcttca acagcaccag aggcagcaca ttacagaggc acctttcaga
661 agttatgtgg acactgcctc gtttacacag agttgcatag tccatgtgtc ggagaaaccc
721 tttacctgca gggagatcag gaaagacttc ctggccaaca tgaggtttct ccatcaagac
781 gccactcaaa caggggagaa gccaaataac agtaacaagt gtgcggtggc cttttacagt
841 ggaaaaagtc atcacaactg gggaaaatgc agtaaagcct ttagccacat agacacactt
901 gttcaggacc agagaatcct cactagagaa ggactttttg agtgcagtaa atgtgggaaa
961 gcatgtacgc gaagatgtaa cctcattcag cacctgaaag tccacagtga agaaaggcct
1021 tatgaatgca atgaatgtgg aaaattcttt acctactact ccagtttcat tatacatcag
1081 agagttcata ctggagaaag gccttatgcg tgccctgaat gtgggaaatc gtttagtcag
1141 atatacagcc tcaatagcca taggaaagtt cacactggag aaaggcctta tgaatgtggg
1201 gaatgtggga aatcttttag ccaaaggtcc aacctcatgc agcatcgcag agttcacact
1261 ggagaaaggc cttatgaatg cagcgaatgt gggaaatctt ttagccaaaa ctttagcctg
1321 atctaccacc agagagttca cactggagaa agacctcatg agtgcaatga atgtggaaaa
1381 tcctttagcc gaagctccag cctcattcac caccggagac ttcacactgg agaaagaccc
1441 tatgagtgca gtaaatgtgg gaagtcattt aagcaaagct ccagcttcag ttcacatcgg
1501 aaagtccaca caggggaaag gccttatgtg tgtggggaat gtgggaaatc ctttagccat
1561 agctccaacc ttaagaacca ccagagagtt cacactggag aaagacctgt tgagtgcagt
1621 gaatgtagca aatcctttag ctgtaaatct aacctcatta aacacctgag agttcacact
1681 ggagaaaggc cttatgagtg cagtgaatgt gggaaatcct ttagccaaag ttctagcctc
1741 attcaacacc gcagagttca cacgggaaaa aggccttatc agtgcagtca atgtgggaaa
1801 tcctttggct gcaaatctgt cctcattcaa caccagagag ttcacattgg agaaaagcct
1861 tagctgtact gagaatatgc aatttccttt tagtgtaatt atactgaagg agtacacctg
1921 tgagagagac aagtacctga tttggaagcc ccaacatcta a
//