LOCUS AK296936 1762 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57029 complete cds, highly similar to Tumor
necrosis factor receptor superfamily member EDAR precursor.
ACCESSION AK296936
VERSION AK296936.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1762)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1762
/clone="CTONG3001445"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000491560"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 226..1668
/codon_start=1
/note="highly similar to Tumor necrosis factor receptor
superfamily member EDAR precursor"
/protein_id="BAG59487.1"
/transl_table=1
/translation="MAHVGDCTQTPWLPVLVVSLMCSARAEYSNCGENEYYNQTTGLC
QECPPCGPGEEPYLSCGYGTKDEDYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVL
TPGDMENDAECGPCLPGYYMLENRPRNIYGMVCYSCLLAPPNTKECVGATSGASANFP
GTSGSSTLSPFQHAHKELSGQGHLATALIIAMSTIFIMAIAIVLIIMFYILKTKPSAP
GDGPHAPVPCLLDSPSTPPVGEPGCSLPPLSPACCTSHPGKSVEAQVSKDEEKKEAPD
NVVMFSEKDEFEKLTATPAKPTKSENDASSENEQLLSRSVDSDEEPAPDKQGSPELCL
LSLVHLAREKSATSNKSAGIQSRRKKILDVYANVCGVVEGLSPTELPFDCLEKTSRML
SSTYNSEKAAVKTWRHLAESFGLKRDEIGGMTDGMQLFDRISTAGYSIPELLTKLVQI
ERLDAVESLCADILEWAGVVPPASQPHAAS"
BASE COUNT 397 a 531 c 513 g 321 t
ORIGIN
1 aaacggaaag gaagcggggc tagtgtcaga gaggtgtgcc aggtcccagg cagccctgct
61 ggcccctaag gacatagagt acctgcttct gagagggctg ccacggtggc cacctgtgaa
121 gcctgtcacc cagaactgga tggtacctga ctttcttcat agacccatct tctgctggga
181 ctgaagctga cctccaacag aagccaggtg agcccttggg agaggatggc ccatgtgggg
241 gactgcacgc agacgccctg gctccccgtc ctggtggtgt ctctgatgtg ctcagcccga
301 gcggaatact caaactgcgg tgagaacgag tactacaacc agactacggg gctgtgccag
361 gagtgccccc cgtgtgggcc gggagaggag ccctacctgt cctgtggcta cggcaccaaa
421 gacgaggact acggctgcgt cccctgcccg gcggagaagt tttccaaagg aggctaccag
481 atatgcaggc gtcacaaaga ctgtgagggc ttcttccggg ccaccgtgct gacaccaggg
541 gacatggaga atgacgctga gtgtggccct tgcctccctg gctactacat gctggagaac
601 agaccgagga acatctatgg catggtctgc tactcctgcc tcctggcacc ccccaacacc
661 aaggaatgtg tgggagccac ttcaggagct tctgccaact tccctggcac ctcgggcagc
721 agcaccctgt ctcccttcca gcacgcccac aaagaactct caggccaagg acacctggcc
781 actgccctga tcattgcaat gtccaccatc ttcatcatgg ccatcgccat cgtcctcatc
841 atcatgttct acatcctgaa gacaaagccc tctgccccag gtgacggccc ccatgcgccg
901 gtgccctgcc tcctggactc tccgtcaact ccccctgtcg gagagcctgg ctgctcactc
961 cctcctctct ccccagcctg ttgcaccagc cacccgggga agagcgtgga ggcccaagtg
1021 agcaaggacg aggagaagaa agaggcccca gacaacgtgg tgatgttctc tgagaaggat
1081 gaatttgaga agctgacagc aactccagca aagcccacca agagcgagaa cgatgcctca
1141 tccgagaatg agcagctgct gagccggagc gtcgacagtg atgaggagcc cgcccctgac
1201 aagcagggct ccccggagct gtgcctgctg tcgctggttc acctggccag ggagaagtct
1261 gccaccagca acaagtcagc cgggattcaa agccggagga aaaagatcct cgatgtgtat
1321 gccaacgtgt gtggagtcgt ggaaggtctt agccccacgg agctgccatt tgattgtctc
1381 gagaagacta gccgaatgct cagctccacg tacaactctg agaaggctgc tgtgaaaacg
1441 tggcgccacc tcgccgagag cttcggcctg aagagggatg agattggggg catgacagac
1501 ggcatgcaac tctttgaccg catcagcacg gcaggctaca gcatccctga gctactcaca
1561 aaactggtgc agattgagcg gctggatgct gtggagtcct tgtgtgcaga catactggag
1621 tgggcggggg ttgtgccacc tgcctcccag ccacatgctg catcctgaaa agcatgcctg
1681 tgggctgtcc tcccaggaca agccaaggat ccaacgaggg ctctggagct gtgagtggtg
1741 ccaaaagact gccaagaatc aa
//