LOCUS AK296876 2388 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54364 complete cds, highly similar to Hypoxia-inducible factor 1 alpha. ACCESSION AK296876 VERSION AK296876.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2388) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2388 /clone="CTONG2023593" /clone_lib="CTONG2" /db_xref="H-InvDB:HIT000491500" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="tumor tissue" /organism="Homo sapiens" /tissue_type="tongue, tumor tissue" CDS 293..2302 /codon_start=1 /note="highly similar to Hypoxia-inducible factor 1 alpha" /protein_id="BAG59438.1" /transl_table=1 /translation="MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQL PLPHNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFF LRMKCTLTSRGRTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEP IPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDS DHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVV SGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLL APAAGDTIISLDFGSNDTETDDQQLEEVPLYNDVMLPSPNEKLQNINLAMSPLPTAET PKPLRSSADPALNQEVALKLEPNPESLELSFTMPQIQDQTPSPSDGSTRQSSPEPNSP SEYCFYVDSDMVNEFKLELVEKLFAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQL RSFDQLSPLESSPASPESASPQSTVTVFQQTQIQEPTANATTTTATTDELKTVTKDRM EDIKILIASPSPTHIHKETTSATSSPYRDTQSRTASPNRAGKGVIEQTEKSHPRSPNV LSVALSQRTTVPEEELNPKILALQNAQRKRKMEHDGSLFQAVGII" BASE COUNT 751 a 554 c 503 g 580 t ORIGIN 1 agtgcacagt gctgcctcgt ctgaggggac aggaggatca ccctcttcgt cgcttcggcc 61 agtgtgtcgg gctgggccct gacaagccac ctgaggagag gctcggagcc gggcccggac 121 cccggcgatt gccgcccgct tctctctagt ctcacgaggg gtttcccgcc tcgcaccccc 181 acctctggac ttgcctttcc ttctcttctc cgcgtgtgga gggagccagc gcttaggccg 241 gagcgagcct gggggccgcc cgccgtgaag acatcgcggg gaccgattca ccatggaggg 301 cgccggcggc gcgaacgaca agaaaaagat aagttctgaa cgtcgaaaag aaaagtctcg 361 agatgcagcc agatctcggc gaagtaaaga atctgaagtt ttttatgagc ttgctcatca 421 gttgccactt ccacataatg tgaacaaata catgggatta actcagtttg aactaactgg 481 acacagtgtg tttgatttta ctcatccatg tgaccatgag gaaatgagag aaatgcttac 541 acacagaaat ggccttgtga aaaagggtaa agaacaaaac acacagcgaa gcttttttct 601 cagaatgaag tgtaccctaa ctagccgagg aagaactatg aacataaagt ctgcaacatg 661 gaaggtattg cactgcacag gccacattca cgtatatgat accaacagta accaacctca 721 gtgtgggtat aagaaaccac ctatgacctg cttggtgctg atttgtgaac ccattcctca 781 cccatcaaat attgaaattc ctttagatag caagactttc ctcagtcgac acagcctgga 841 tatgaaattt tcttattgtg atgaaagaat taccgaattg atgggatatg agccagaaga 901 acttttaggc cgctcaattt atgaatatta tcatgctttg gactctgatc atctgaccaa 961 aactcatcat gatatgttta ctaaaggaca agtcaccaca ggacagtaca ggatgcttgc 1021 caaaagaggt ggatatgtct gggttgaaac tcaagcaact gtcatatata acaccaagaa 1081 ttctcaacca cagtgcattg tatgtgtgaa ttacgttgtg agtggtatta ttcagcacga 1141 cttgattttc tcccttcaac aaacagaatg tgtccttaaa ccggttgaat cttcagatat 1201 gaaaatgact cagctattca ccaaagttga atcagaagat acaagtagcc tctttgacaa 1261 acttaagaag gaacctgatg ctttaacttt gctggcccca gccgctggag acacaatcat 1321 atctttagat tttggcagca acgacacaga aactgatgac cagcaacttg aggaagtacc 1381 attatataat gatgtaatgc tcccctcacc caacgaaaaa ttacagaata taaatttggc 1441 aatgtctcca ttacccaccg ctgaaacgcc aaagccactt cgaagtagtg ctgaccctgc 1501 actcaatcaa gaagttgcat taaaattaga accaaatcca gagtcactgg aactttcttt 1561 taccatgccc cagattcagg atcagacacc tagtccttcc gatggaagca ctagacaaag 1621 ttcacctgag cctaatagtc ccagtgaata ttgtttttat gtggatagtg atatggtcaa 1681 tgaattcaag ttggaattgg tagaaaaact ttttgctgaa gacacagaag caaagaaccc 1741 attttctact caggacacag atttagactt ggagatgtta gctccctata tcccaatgga 1801 tgatgacttc cagttacgtt ccttcgatca gttgtcacca ttagaaagca gtcccgcaag 1861 ccctgaaagc gcaagtcctc aaagcacagt tacagtattc cagcagactc aaatacaaga 1921 acctactgct aatgccacca ctaccactgc caccactgat gaattaaaaa cagtgacaaa 1981 agaccgtatg gaagacatta aaatattgat tgcatctcca tctcctaccc acatacataa 2041 agaaactact agtgccacat catcaccata tagagatact caaagtcgga cagcctcacc 2101 aaacagagca ggaaaaggag tcatagaaca gacagaaaaa tctcatccaa gaagccctaa 2161 cgtgttatct gtcgctttga gtcaaagaac tacagttcct gaggaagaac taaatccaaa 2221 gatactagct ttgcagaatg ctcagagaaa gcgaaaaatg gaacatgatg gttcactttt 2281 tcaagcagta ggaattattt agcatgtaga ctgctggggc aatcaatgga tgaaagtgga 2341 ttaccacagc tgaccagtta tgattgtgaa gttaatgctc ctatacaa //