LOCUS AK296870 1749 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51233 complete cds, highly similar to RNA
polymerase II elongation factor ELL2.
ACCESSION AK296870
VERSION AK296870.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1749)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1749
/clone="CTONG2023111"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491494"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 131..1141
/codon_start=1
/note="highly similar to RNA polymerase II elongation
factor ELL2"
/protein_id="BAG59433.1"
/transl_table=1
/translation="MAAGGTGGLREEQRYGLLDSEFIDPLMNKKARISHLTNRVPPTL
NGHLNPTSEKSAAGLPLPPAAAAIPTPPPLPSTYLPISHPPQIVNSNSNSPSTPEGRG
TQDLPVDSFSQNDSIYEDQQDKYTSRTSLETLPPGSVLLKCPKPMEENHSMSHKKSKK
KSKKHKEKDQIKKHDIETIEEKEEDLKREEEIAKLNNSSPNSSGGVKEDCTASMEPSA
IELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDAQRKRLS
PGSKEYQNVHEEVLQEYQKIKQSSPNYHEEKYRCEYLHNKLAHIKRLIGEFDQQQAES
WS"
BASE COUNT 557 a 371 c 365 g 456 t
ORIGIN
1 agtatatgac agtacgtcag cagcgggatg gccctagcag tggcggcggc tgcagaagcc
61 caagcagccg cggccgcagt ggaggctaga gccggagcgg cggcggcggc ggcaccccgg
121 ggagtttaag atggcggcgg gggggacagg gggcctgcgg gaggagcagc gctatgggct
181 tttggattca gagtttattg atcctttaat gaataaaaaa gcccgaatat ctcacctgac
241 gaacagagta ccaccaacac taaatggtca tttgaatccc accagtgaaa aatcggctgc
301 aggcctccca ctgccccctg cggctgctgc catccccacc cctccaccgc tgccttcaac
361 ctatctgccc atctcacatc ctcctcagat tgtaaattct aactccaact cccctagcac
421 tccagaaggc cgggggactc aagacctacc tgttgacagt tttagtcaaa acgatagtat
481 ctatgaggac cagcaagaca aatatacctc taggacttct ctggaaacct taccccctgg
541 ttccgttcta ctaaagtgtc caaagcctat ggaagaaaac cattcaatgt ctcacaaaaa
601 gtccaaaaag aagtctaaaa aacataagga aaaggaccaa ataaaaaagc acgacattga
661 gactattgag gaaaaggagg aagatcttaa gagagaagag gaaattgcca agctaaataa
721 ctccagtcca aattccagtg gaggagttaa agaggattgc actgcctcca tggaaccttc
781 agcaattgaa ctcccagatt atttgataaa atatatcgct atcgtctcct atgagcaacg
841 ccagaattat aaggatgact tcaatgcaga gtatgatgag tacagagctt tgcatgccag
901 gatggagact gtagctagaa gatttatcaa actagatgca caaagaaagc gcctttctcc
961 aggctcaaaa gagtatcaga atgttcatga agaagtctta caagaatatc agaagataaa
1021 gcagtctagt cccaattacc atgaagaaaa atacagatgt gaatatcttc ataacaagct
1081 ggctcacatc aaaaggctaa taggtgaatt tgaccaacag caagcagagt catggtccta
1141 gaactctgct tggaccagaa gatgtgaata aacttaagct tatttattta aaattccaaa
1201 tgagttgctc tagattctaa aaaggtgaaa ctttggctgt tgaaagtttc agtattagta
1261 aacttgagtt actttttctt ttccatttta ctttgcttcc ctgcatttcg aagctgctct
1321 ttctggtcct ccccaccacc ccacccccaa gacttgtgtt tgttaataga aataattttt
1381 ttaggtattg gggatccatt gtctatattt caaatcagtt ttttttcctc aaaaacttgt
1441 gtttgttatt agaaatgatt ttttagatat tggggatcca gtgtccacac ttaaaagttg
1501 tatgtgttta aaaaacaaca acagtaatgt gcaaggtgaa atgcttttgg ataaacgtaa
1561 gcctattttc tgacgtttct taatgcaaac tctttgcctt aaatggtaga atatttagaa
1621 atttgcacaa aattaaaaaa ataaacattg tcttggaggg ttaaaaaata gaaaggtgta
1681 tgtgtataga ttcacataca catatgtata tacaggctga cttgatctag aacattaaat
1741 ccgccctgc
//