LOCUS AK296833 3502 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ57825 complete cds, highly similar to DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1). ACCESSION AK296833 VERSION AK296833.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3502) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3502 /clone="CTONG2018530" /clone_lib="CTONG2" /db_xref="H-InvDB:HIT000491457" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="tumor tissue" /organism="Homo sapiens" /tissue_type="tongue, tumor tissue" CDS 11..3403 /codon_start=1 /note="highly similar to DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)" /protein_id="BAG59403.1" /transl_table=1 /translation="MAGSGAGVRCSLLRLQETLSAADRCGAALAGHQLIRGLGQECVL SSSPAVLALQTSLVFSRGFGLLVFVRKSLNSIEFRECREEILKFLCIFLEKMGQKIAP YSVEIKNTCTSVYTKDRAAKCKIPALDLLIKLLQTFRSSRLMDEFKIGELFSKFYGEL ALKKKIPDTVLEKVYELLGLLGEVHPSEMINNAENLFRAFLGELKTQMTSAVREPKLP VLAGCLKGLSSLLCNFTKSMEEDPQTSREIFNFVLKAIRPQIDLKRYAVPSAGLRLFA LHASQFSTCLLDNYVSLFEVLLKWCAHTNVELKKAALSALESFLKQVSNMVAKNAEMH KNKLQYFMEQFYGIIRNVDSNNKELSIAIRGYGLFAGPCKVINAKDVDFMYVELIQRC KQMFLTQTDTGDDRVYQMPSFLQSVASVLLYLDTVPEVYTPVLEHLVVMQIDSFPQYS PKMQLVCCRAIVKVFLALAAKGPVLRNCISTVVHQGLIRICSKPVVLPKGPESESEDH RASGEVRTGKWKVPTYKDYVDLFRHLLSSDQMMDSILADEAFFSVNSSSESLNHLLYD EFVKSVLKIVEKLDLTLEIQTVGEQENGDEAPGVWMIPTSDPAANLHPAKPKDFSAFI NLVEFCREILPEKQAEFFEPWVYSFSYELILQSTRLPLISGFYKLLSITVRNAKKIKY FEGVSPKSLKHSPEDPEKYSCFALFVKFGKEVAVKMKQYKDELLASCLTFLLSLPHNI IELDVRAYVPALQMAFKLGLSYTPLAEVGLNALEEWSIYIDRHVMQPYYKDILPCLDG YLKTSALSDETKNNWEVSALSRAAQKGFNKVVLKHLKKTKNLSSNEAISLEEIRIRVV QMLGSLGGQINKNLLTVTSSDEMMKSYVAWDREKRLSFAVPFREMKPVIFLDVFLPRV TELALTASDRQTKVAACELLHSMVMFMLGKATQMPEGGQGAPPMYQLYKRTFPVLLRL ACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLEAILDGIVDPVDSTLRDFCG RCIREFLKWSIKQITPQQQEKSPVNTKSLFKRLYSLALHPNAFKRLGASLAFNNIYRE FREEESLVEQFVFEALVIYMESLALAHADEKSSTPKLFLIGF" BASE COUNT 982 a 709 c 804 g 1007 t ORIGIN 1 actcggcggc atggcgggct ccggagccgg tgtgcgttgc tccctgctgc ggctgcagga 61 gaccttgtcc gctgcggacc gctgcggtgc tgccctggcc ggtcatcaac tgatccgcgg 121 cctggggcag gaatgcgtcc tgagcagcag ccccgcggtg ctggcattac agacatcttt 181 agttttttcc agaggtttcg gtttgcttgt atttgtccgg aagtcactca acagtattga 241 atttcgtgaa tgtagagaag aaatcctaaa gtttttatgt attttcttag aaaaaatggg 301 ccagaagatc gcaccttact ctgttgaaat taagaacact tgtaccagtg tttatacaaa 361 agatagagct gctaaatgta aaattccagc cctggacctt cttattaagt tacttcagac 421 ttttagaagt tctagactca tggatgaatt taaaattgga gaattattta gtaaattcta 481 tggagaactt gcattgaaaa aaaaaatacc agatacagtt ttagaaaaag tatatgagct 541 cctaggatta ttgggtgaag ttcatcctag tgagatgata aataatgcag aaaacctgtt 601 ccgcgctttt ctgggtgaac ttaagaccca gatgacatca gcagtaagag agcccaaact 661 acctgttctg gcaggatgtc tgaaggggtt gtcctcactt ctgtgcaact tcactaagtc 721 catggaagaa gatccccaga cttcaaggga gatttttaat tttgtactaa aggcaattcg 781 tcctcagatt gatctgaaga gatatgctgt gccctcagct ggcttgcgcc tatttgccct 841 gcatgcatct cagtttagca cctgccttct ggacaactac gtgtctctat ttgaagtctt 901 gttaaagtgg tgtgcccaca caaatgtaga attgaaaaaa gctgcacttt cagccctgga 961 atcctttctg aaacaggttt ctaatatggt ggcgaaaaat gcagaaatgc ataaaaataa 1021 actgcagtac tttatggagc agttttatgg aatcatcaga aatgtggatt cgaacaacaa 1081 ggagttatct attgctatcc gtggatatgg actttttgca ggaccgtgca aggttataaa 1141 cgcaaaagat gttgacttca tgtacgttga gctcattcag cgctgcaagc agatgttcct 1201 cacccagaca gacactggtg acgaccgtgt ttatcagatg ccaagcttcc tccagtctgt 1261 tgcaagcgtc ttgctgtacc ttgacacagt tcctgaggtg tatactccag ttctggagca 1321 cctcgtggtg atgcagatag acagtttccc acagtacagt ccaaaaatgc agctggtgtg 1381 ttgcagagcc atagtgaagg tgttcctagc tttggcagca aaagggccag ttctcaggaa 1441 ttgcattagt actgtggtgc atcagggttt aatcagaata tgttctaaac cagtggtcct 1501 tccaaagggc cctgagtctg aatctgaaga ccaccgtgct tcaggggaag tcagaactgg 1561 caaatggaag gtgcccacat acaaagacta cgtggatctc tttagacatc tcctgagctc 1621 tgaccagatg atggattcta ttttagcaga tgaagcattt ttctctgtga attcctccag 1681 tgaaagtctg aatcatttac tttatgatga atttgtaaaa tccgttttga agattgttga 1741 gaaattggat cttacacttg aaatacagac tgttggggaa caagagaatg gagatgaggc 1801 gcctggtgtt tggatgatcc caacttcaga tccagcggct aacttgcatc cagctaaacc 1861 taaagatttt tcggctttca ttaacctggt ggaattttgc agagagattc tccctgagaa 1921 acaagcagaa ttttttgaac catgggtgta ctcattttca tatgaattaa ttttgcaatc 1981 tacaaggttg cccctcatca gtggtttcta caaattgctt tctattacag taagaaatgc 2041 caagaaaata aaatatttcg agggagttag tccaaagagt ctgaaacact ctcctgaaga 2101 cccagaaaag tattcttgct ttgctttatt tgtgaaattt ggcaaagagg tggcagttaa 2161 aatgaagcag tacaaagatg aacttttggc ctcttgtttg acctttcttc tgtccttgcc 2221 acacaacatc attgaactcg atgttagagc ctacgttcct gcactgcaga tggctttcaa 2281 actgggcctg agctataccc ccttggcaga agtaggcctg aatgctctag aagaatggtc 2341 aatttatatt gacagacatg taatgcagcc ttattacaaa gacattctcc cctgcctgga 2401 tggatacctg aagacttcag ccttgtcaga tgagaccaag aataactggg aagtgtcagc 2461 tctttctcgg gctgcccaga aaggatttaa taaagtggtg ttaaagcatc tgaagaagac 2521 aaagaacctt tcatcaaacg aagcaatatc cttagaagaa ataagaatta gagtagtaca 2581 aatgcttgga tctctaggag gacaaataaa caaaaatctt ctgacagtca cgtcctcaga 2641 tgagatgatg aagagctatg tggcctggga cagagagaag cggctgagct ttgcagtgcc 2701 ctttagagag atgaaacctg tcattttcct ggatgtgttc ctgcctcgag tcacagaatt 2761 agcgctcaca gccagtgaca gacaaactaa agttgcagcc tgtgaacttt tacatagcat 2821 ggttatgttt atgttgggca aagccacgca gatgccagaa gggggacagg gagccccacc 2881 catgtaccag ctctataagc ggacgtttcc tgtgctgctt cgacttgcgt gtgatgttga 2941 tcaggtgaca aggcaactgt atgagccact agttatgcag ctgattcact ggttcactaa 3001 caacaagaaa tttgaaagtc aggatactgt tgccttacta gaagctatat tggatggaat 3061 tgtggaccct gttgacagta ctttaagaga tttttgtggt cggtgtattc gagaattcct 3121 taaatggtcc attaagcaaa taacaccaca gcagcaggag aagagtccag taaacaccaa 3181 atcgcttttc aagcgacttt atagccttgc gcttcacccc aatgctttca agaggctggg 3241 agcatcactt gcctttaata atatctacag ggaattcagg gaagaagagt ctctggtgga 3301 acagtttgtg tttgaagcct tggtgatata catggagagt ctggccttag cacatgcaga 3361 tgagaagtcc tccacaccca aactgtttct gattggcttt tagctttttg ttgttttttt 3421 ttttccttct aacacttgta tttggaggct cttctgtgat tttgagaagt atactcttga 3481 gtgtttaata aagttttttt cc //