LOCUS AK296823 943 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59922 complete cds, highly similar to
Keratin, type II cytoskeletal 5.
ACCESSION AK296823
VERSION AK296823.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 943)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..943
/clone="CTONG2017065"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491447"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 215..919
/codon_start=1
/note="highly similar to Keratin, type II cytoskeletal 5"
/protein_id="BAG59394.1"
/transl_table=1
/translation="MQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELE
AKVDALMDEINFMKMFFDAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEE
IANRSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQ
CANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLREYQELMNTKLALD
VEIATYRKLLEGEECR"
BASE COUNT 248 a 246 c 283 g 166 t
ORIGIN
1 tacagagcca ccttctgcgt cctgctgagc tctgttctct ccagcacctc ccaacccact
61 agtgcctggt tctcttgctc caccaggaac aagccaccat gtctcgccag tcaagtgtgt
121 ccttccggag cgggagcagt acatcaacaa cctcaggagg cagctggaca gcatcgtggg
181 ggaacggggc cgcctggact cagagctgag aaacatgcag gacctggtgg aagacttcaa
241 gaacaagtat gaggatgaaa tcaacaagcg taccactgct gagaatgagt ttgtgatgct
301 gaagaaggat gtagatgctg cctacatgaa caaggtggag ctggaggcca aggttgatgc
361 actgatggat gagattaact tcatgaagat gttctttgat gcggagctgt cccagatgca
421 gacgcatgtc tctgacacct cagtggtcct ctccatggac aacaaccgca acctggacct
481 ggatagcatc atcgctgagg tcaaggccca gtatgaggag attgccaacc gcagccggac
541 agaagccgag tcctggtatc agaccaagta tgaggagctg cagcagacag ctggccggca
601 tggcgatgac ctccgcaaca ccaagcatga gatctctgag atgaaccgga tgatccagag
661 gctgagagcc gagattgaca atgtcaagaa acagtgcgcc aatctgcaga acgccatcgc
721 ggatgccgag cagcgtgggg agctggccct caaggatgcc aggaacaagc tggccgagct
781 ggaggaggcc ctgcagaagg ccaagcagga catggcccgg ctgctgcgtg agtaccagga
841 gctcatgaac accaagctgg ccctggacgt ggagatcgcc acttaccgca agctgctgga
901 gggcgaggaa tgcaggtgag tagacagcat gaactcaaga tgg
//