LOCUS AK296816 1285 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55850 complete cds.
ACCESSION AK296816
VERSION AK296816.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1285)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1285
/clone="CTONG2015654"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491440"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 4..981
/codon_start=1
/protein_id="BAG59389.1"
/transl_table=1
/translation="MQQPVRAGDIGVSRVQTHHNASPFSVPKKQDESPMIGDGEDYFL
SLFGDSKKLTAHSNYTQKTLKYFSMILEEVGQFTSSSLGDVEIAEVNVKGLFVKLINS
SLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVWAAASEAKHQPPSDFLW
KEQDKFRASPDCITILCKPNGQAIAWYTPIHWKQAWEKLDADVEFNRCSVVSPTFRKR
VFQWTASTATITKEKQDQPKKDISNYQVEQAQVLLKREKEIPPTVFPNRSPWCQNPYV
SAHPYCPLIEPHNTSTAGGRLDRQPRSRSTRPNRASGSKKKETSESQKQ"
BASE COUNT 378 a 318 c 272 g 317 t
ORIGIN
1 tacatgcaac agccagtgag agcaggagac atcggtgttt ccagagtcca gacccaccac
61 aatgccagcc ccttctcagt tccgaagaaa caggatgaat cacccatgat tggggatgga
121 gaagattatt tcctttcttt gtttggtgat tcaaagaaac ttacagcaca ctcaaactac
181 actcagaaaa ctttaaaata cttttctatg attcttgaag aagttggcca atttacctcc
241 agttctcttg gagatgttga aatagctgaa gtgaatgtca agggtttgtt cgtgaagctc
301 attaactctt cccttgacaa agaaatggca attggagatc atattctcca gcaaaatgtg
361 aatggacaaa ccatttcttt gtaccgattc cttccaaaca tcgtaatgca ggcaaattcc
421 acagtaacag tgtgggcagc agcatctgaa gcaaagcatc aacctccatc agattttctt
481 tggaaggaac aagacaagtt tagagcaagt cctgattgta taacaatcct gtgcaaaccg
541 aacggtcaag ccattgcgtg gtacacccct atccactgga agcaagcgtg ggaaaaatta
601 gatgctgacg ttgaatttaa cagatgttca gtagtatctc caacattccg aaagcgtgtg
661 tttcagtgga cagcatctac agctacaata actaaagaaa aacaagatca acctaagaaa
721 gatatctcaa attatcaggt ggaacaagct caagttcttc ttaagagaga gaaggaaatc
781 ccaccaaccg ttttccctaa tcgcagccct tggtgccaga atccctatgt ctccgcacat
841 ccttactgtc ctctgattga accacacaat acatccaccg ctggaggcag attggataga
901 cagcccaggt ctcggtcaac cagacctaat cgagcctcag ggtctaagaa aaaggagaca
961 tctgagtcac aaaagcaata agcagtcaac tcaaccttta aagatggagt ctcactctgt
1021 tgcccaggct ggagtgcagt ggtgtgatct ccactaactg cagcctccgc ctcccaggtt
1081 caagtgagtc tcctgcgtca gcctcccgag tagctgggat tacaggcatc cgccaccctg
1141 catggctaat ttttgtattt ttagtagcaa cgaggtttca ccatgttggc caggctggtc
1201 tcgaattcct gacctcaggt gatctgcctg ccttggcctc ccaaagtgct gggattacac
1261 gcatgagcca ccatgcccgg cgcaa
//