LOCUS AK296796 1844 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51885 complete cds, highly similar to
Suppressor of cytokine signaling 5.
ACCESSION AK296796
VERSION AK296796.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1844)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1844
/clone="CTONG2013696"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491420"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 216..1733
/codon_start=1
/note="highly similar to Suppressor of cytokine signaling
5"
/protein_id="BAG59372.1"
/transl_table=1
/translation="MNSNRCLSVKEKNISIGDSTPQQQSSPLRENIALQLGLSPSKNS
SRRNQNCATEIPQIVEISIEKDNDSCVTPGTRLARRDSYSRHAPWGGKKKHSCSTKTQ
SSLDADKKFGRTRSGLQRRERRYGVSSVHDMDSVSSRTVGSRSLRQRLQDTVGLCFPM
RTYSKQSKPLFSNKRKIHLSELMLEKCPFPAGSDLAQKWHLIKQHTAPVSPHSTFFDT
FDPSLVSTEDEEDRLRERRRLSIEEGVDPPPNAQIHTFEATAQVNPLYKLGPKLAPGM
TEISGDSSAIPQANCDSEEDTTTLCLQSRRQKQRQISGDSHTHVSRQGAWKVHTQIDY
IHCLVPDLLQITGNPCYWGVMDRYEAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYN
RSLHARIEQWNHNFSFDAHDPCVFHSSTVTGLLEHYKDPSSCMFFEPLLTISLNRTFP
FSLQYICRAVICRCTTYDGIDGLPLPSMLQDFLKEYHYKQKVRVRWLEREPVKAK"
BASE COUNT 527 a 443 c 415 g 459 t
ORIGIN
1 aatggcagcc gcgcagagcg cgcacccaag cggccggacc tccccgactc ccgggccgcc
61 cccgtctcgc gccctgcctc cctccttcgg ccttcaccta cccgcctccg gattggccgc
121 taggaatccc gcccctctaa agccctgcct gctattggtc acggtgtcag aatctcttcg
181 gtcatgaggg aggaagccgt agtgaaaatg tggacatgaa ctccaacaga tgtttgtctg
241 tcaaagagaa aaacatcagc ataggagact caactcctca gcaacaaagc agtcccttaa
301 gagaaaatat tgccttacaa ctgggattaa gcccttcgaa gaattcttca aggagaaatc
361 aaaattgtgc cacagaaatc cctcaaattg ttgaaataag catcgaaaag gataatgatt
421 cttgtgttac cccaggaaca agacttgcac gaagagattc ctactctcga catgctccat
481 ggggtgggaa gaaaaaacat tcctgttcta caaagaccca gagttcattg gatgctgata
541 aaaagtttgg tagaactcga agtggacttc aaaggagaga gaggcgctac ggcgtaagtt
601 ctgtacacga catggacagt gtttccagca gaactgtagg aagtcgctct ctaagacaga
661 ggttgcagga tactgtgggc ttgtgttttc ccatgagaac ttacagcaag cagtcaaagc
721 ctctcttttc caataaaaga aaaatccatc tctctgaatt aatgcttgag aaatgccctt
781 ttcctgctgg ctcagattta gcccaaaaat ggcatttgat taaacagcat acagctcctg
841 tgagcccaca ttcaacgttt tttgatacat ttgatccatc tttggtttct acagaagatg
901 aagaagatag gcttagagag agaaggcggc ttagtattga agaaggggtt gatccccctc
961 ccaatgcaca aatacataca tttgaagcta ctgcacaggt taatccatta tataaactgg
1021 gaccaaaatt agctcctgga atgactgaaa taagtgggga cagttctgca attccacaag
1081 ctaattgtga ctcggaagag gatacaacca ccctgtgttt gcagtcacgg aggcagaagc
1141 agcgtcagat atctggagac agccataccc atgttagcag acagggagct tggaaagtcc
1201 acacacagat tgattacata cactgcctcg tgcctgattt gcttcaaatt acagggaatc
1261 cctgttactg gggagtgatg gaccgttatg aagcagaagc ccttctcgaa gggaaacctg
1321 aaggcacgtt tttgctcagg gactctgcgc aagaggacta cctcttctct gtgagcttcc
1381 gccgctacaa cagatccctg catgcccgaa ttgagcagtg gaatcacaac tttagtttcg
1441 acgcccatga cccgtgtgta tttcactcct ccactgtaac gggactttta gaacattata
1501 aagatcccag ttcgtgcatg ttttttgaac cattgcttac tatatcacta aataggactt
1561 tcccttttag cctgcagtat atctgtcgcg cggtaatctg caggtgcact acgtatgatg
1621 gaattgatgg gctccctcta ccctcaatgt tacaggattt tttaaaagag tatcattata
1681 aacaaaaagt tagagttcgc tggttggaac gagaaccagt caaggcaaag taaactctcc
1741 ggtccccaaa gggtgttaac taggtccgct ttcatgtgca tcagacagta cacctatagc
1801 aagcacacgt agcagtgtta ggctttttca tacagtatgt aagc
//