LOCUS AK296788 2604 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51229 complete cds, highly similar to Ephrin
type-A receptor 2 precursor (EC 2.7.10.1).
ACCESSION AK296788
VERSION AK296788.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2604)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2604
/clone="CTONG2012685"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491412"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 290..2254
/codon_start=1
/note="highly similar to Ephrin type-A receptor 2
precursor (EC 2.7.10.1)"
/protein_id="BAG59366.1"
/transl_table=1
/translation="MPCTRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTC
EQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTS
RSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSY
NVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPEGSGNLAVIGG
VAVGVVLLLVLAGVGFFIHRRRKNQRARQSPEDVYFSKSEQLKPLKTYVDPHTYEDPN
QAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ
RVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL
QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY
TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI
NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFD
PRVSIRLPSTSGSEGVPFRTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKR
IGVRLPGHQKRIAYSLLGLKDQVNTVGTPI"
BASE COUNT 522 a 818 c 814 g 450 t
ORIGIN
1 attaaggact cggggcagga ggggcagaag ttgcgcgcag gccggcgggc gggagcggac
61 accgaggccg gcgtgcaggc gtgcgggtgt gcgggagccg ggctcggggg gatcggaccg
121 agagcgagaa gcgcggcatg gagctccagg cagcccgcgc ctgcttcgcc ctgctgtggg
181 gctgtgcgct ggccgcggcc gcggcggcgc agggcaagga agtggtactg ctggactttg
241 ctgcgagtgt gaggaaggct tcttccgggc acctcaggac ccagcgtcga tgccttgcac
301 acgaccccct tccgccccac actacctcac agccgtgggc atgggtgcca aggtggagct
361 gcgctggacg ccccctcagg acagcggggg ccgcgaggac attgtctaca gcgtcacctg
421 cgaacagtgc tggcccgagt ctggggaatg cgggccgtgt gaggccagtg tgcgctactc
481 ggagcctcct cacggactga cccgcaccag tgtgacagtg agcgacctgg agccccacat
541 gaactacacc ttcaccgtgg aggcccgcaa tggcgtctca ggcctggtaa ccagccgcag
601 cttccgtact gccagtgtca gcatcaacca gacagagccc cccaaggtga ggctggaggg
661 ccgcagcacc acctcgctta gcgtctcctg gagcatcccc ccgccgcagc agagccgagt
721 gtggaagtac gaggtcactt accgcaagaa gggagactcc aacagctaca atgtgcgccg
781 caccgagggt ttctccgtga ccctggacga cctggcccca gacaccacct acctggtcca
841 ggtgcaggca ctgacgcagg agggccaggg ggccggcagc aaggtgcacg aattccagac
901 gctgtccccg gagggatctg gcaacttggc ggtgattggc ggcgtggctg tcggtgtggt
961 cctgcttctg gtgctggcag gagttggctt ctttatccac cgcaggagga agaaccagcg
1021 tgcccgccag tccccggagg acgtttactt ctccaagtca gaacaactga agcccctgaa
1081 gacatacgtg gacccccaca catatgagga ccccaaccag gctgtgttga agttcactac
1141 cgagatccat ccatcctgtg tcactcggca gaaggtgatc ggagcaggag agtttgggga
1201 ggtgtacaag ggcatgctga agacatcctc ggggaagaag gaggtgccgg tggccatcaa
1261 gacgctgaaa gccggctaca cagagaagca gcgagtggac ttcctcggcg aggccggcat
1321 catgggccag ttcagccacc acaacatcat ccgcctagag ggcgtcatct ccaaatacaa
1381 gcccatgatg atcatcactg agtacatgga gaatggggcc ctggacaagt tccttcggga
1441 gaaggatggc gagttcagcg tgctgcagct ggtgggcatg ctgcggggca tcgcagctgg
1501 catgaagtac ctggccaaca tgaactatgt gcaccgtgac ctggctgccc gcaacatcct
1561 cgtcaacagc aacctggtct gcaaggtgtc tgactttggc ctgtcccgcg tgctggagga
1621 cgaccccgag gccacctaca ccaccagtgg cggcaagatc cccatccgct ggaccgcccc
1681 ggaggccatt tcctaccgga agttcacctc tgccagcgac gtgtggagct ttggcattgt
1741 catgtgggag gtgatgacct atggcgagcg gccctactgg gagttgtcca accacgaggt
1801 gatgaaagcc atcaatgatg gcttccggct ccccacaccc atggactgcc cctccgccat
1861 ctaccagctc atgatgcagt gctggcagca ggagcgtgcc cgccgcccca agttcgctga
1921 catcgtcagc atcctggaca agctcattcg tgcccctgac tccctcaaga ccctggctga
1981 ctttgacccc cgcgtgtcta tccggctccc cagcacgagc ggctcggagg gggtgccctt
2041 ccgcacggtg tccgagtggc tggagtccat caagatgcag cagtatacgg agcacttcat
2101 ggcggccggc tacactgcca tcgagaaggt ggtgcagatg accaacgacg acatcaagag
2161 gattggggtg cggctgcccg gccaccagaa gcgcatcgcc tacagcctgc tgggactcaa
2221 ggaccaggtg aacactgtgg ggacccccat ctgagcctcg acagggcctg tagccccatc
2281 ggccaagaat acttgaagaa acagagtggc ctccctgctg tgccatgctg ggccactggg
2341 gactttattt atttctagtt ctttcctccc cctgcaactt ccgctgaggg gtctcggatg
2401 acaccctggc ctgaactgag gagatgacca gggatgctgg gctgggccct ctttccctgc
2461 gagacgcaca cagctgagca cttagcaggc accgccacgt cccagcatcc ctggagcagg
2521 agccccgcca cagccttcgg acagacatat gggatattcc caagccgacc ttccctccgc
2581 cttctcccac atgaggccat ctca
//