LOCUS AK296786 2288 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56101 complete cds, highly similar to
SHC-transforming protein 1.
ACCESSION AK296786
VERSION AK296786.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2288)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2288
/clone="CTONG2012075"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491410"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 225..1787
/codon_start=1
/note="highly similar to SHC-transforming protein 1"
/protein_id="BAG59364.1"
/transl_table=1
/translation="MSNLRLANPAGGRPGSKGEPGRAADDGEGIVGAAMPDSGPLPLL
QDMNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRY
MGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSN
LKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPV
NQRACHILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEE
EEEPPDHQYYNDFPGKEPPLGGVVDMRLREGAAPGAARPTAPNAQTPSHLGATLPVGQ
PVGGDPEVRKQMPPPPPCPAGRELFDDPSYVNVQNLDKARQAVGGAGPPNPAINGSAP
RDLFDMKPFEDALRVPPPPQSVSMAEQLRGEPWFHGKLSRREAEALLQLNGDFLVRES
TTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGS
ELCLQQPVERKL"
BASE COUNT 483 a 679 c 658 g 468 t
ORIGIN
1 gaagaggctc cacgttgggc ggggatgggg cctgaaactg tctgggcagc agccccaagt
61 acaatccact ccggaatgag tctctgtcat cgctggagga aggggcttct gggtccaccc
121 ccccggagga gctgccttcc ccatcagctt catccctggg gcccatcctg cctcctctgc
181 ctggggacga tagtcccact accctgtgct ccttcttccc ccggatgagc aacctgaggc
241 tggccaaccc ggctgggggg cgcccagggt ctaaggggga gccaggaagg gcagctgatg
301 atggggaggg gatcgtaggg gcagccatgc cagactcagg ccccctaccc ctcctccagg
361 acatgaacaa gctgagtgga ggcggcgggc gcaggactcg ggtggaaggg ggccagcttg
421 ggggcgagga gtggacccgc cacgggagct ttgtcaataa gcccacgcgg ggctggctgc
481 atcccaacga caaagtcatg ggacccgggg tttcctactt ggttcggtac atgggttgtg
541 tggaggtcct ccagtcaatg cgtgccctgg acttcaacac ccggactcag gtcaccaggg
601 aggccatcag tctggtgtgt gaggctgtgc cgggtgctaa gggggcgaca aggaggagaa
661 agccctgtag ccgcccgctc agctctatcc tggggaggag taacctgaaa tttgctggaa
721 tgccaatcac tctcaccgtc tccaccagca gcctcaacct catggccgca gactgcaaac
781 agatcatcgc caaccaccac atgcaatcta tctcatttgc atccggcggg gatccggaca
841 cagccgagta tgtcgcctat gttgccaaag accctgtgaa tcagagagcc tgccacattc
901 tggagtgtcc cgaagggctt gcccaggatg tcatcagcac cattggccag gccttcgagt
961 tgcgcttcaa acaatacctc aggaacccac ccaaactggt cacccctcat gacaggatgg
1021 ctggctttga tggctcagca tgggatgagg aggaggaaga gccacctgac catcagtact
1081 ataatgactt cccggggaag gaacccccct tggggggggt ggtagacatg aggcttcggg
1141 aaggagccgc tccaggggct gctcgaccca ctgcacccaa tgcccagacc cccagccact
1201 tgggagctac attgcctgta ggacagcctg ttgggggaga tccagaagtc cgcaaacaga
1261 tgccacctcc accaccctgt ccagcaggca gagagctttt tgatgatccc tcctatgtca
1321 acgtccagaa cctagacaag gcccggcaag cagtgggtgg tgctgggccc cccaatcctg
1381 ctatcaatgg cagtgcaccc cgggacctgt ttgacatgaa gcccttcgaa gatgctcttc
1441 gcgtgcctcc acctccccag tcggtgtcca tggctgagca gctccgaggg gagccctggt
1501 tccatgggaa gctgagccgg cgggaggctg aggcactgct gcagctcaat ggggacttcc
1561 tggtacggga gagcacgacc acacctggcc agtatgtgct cactggcttg cagagtgggc
1621 agcctaagca tttgctactg gtggaccctg agggtgtggt tcggactaag gatcaccgct
1681 ttgaaagtgt cagtcacctt atcagctacc acatggacaa tcacttgccc atcatctctg
1741 cgggcagcga actgtgtcta cagcaacctg tggagcggaa actgtgatct gccctagcgc
1801 tctcttccag aagatgccct ccaatccttt ccaccctatt ccctaactct cgggacctcg
1861 tttgggagtg ttctgtgggc ttggccttgt gtcagagctg ggagtagcat ggactctggg
1921 tttcatatcc agctgagtga gagggtttga gtcaaaagcc tgggtgagaa tcctgcctct
1981 ccccaaacat taatcaccaa agtattaatg tacagagtgg cccctcacct gggcctttcc
2041 tgtgccaacc tgatgcccct tccccaagaa ggtgagtgct tgtcatggaa aatgtcctgt
2101 ggtgacaggc ccagtggaac agtcaccctt ctgggcaagg gggaacaaat cacacctctg
2161 ggcttcaggg tatcccagac ccctctcaac acccgccccc cccatgttta aactttgtgc
2221 ctttgaccat ctcttaggtc taatgatatt ttatgcaaac agttcttgga cccctgaatt
2281 caatgaca
//