LOCUS AK296783 2475 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55705 complete cds, highly similar to
Threonyl-tRNA synthetase, cytoplasmic (EC 6.1.1.3).
ACCESSION AK296783
VERSION AK296783.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2475)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2475
/clone="CTONG2011502"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491407"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 313..2121
/codon_start=1
/note="highly similar to Threonyl-tRNA synthetase,
cytoplasmic (EC 6.1.1.3)"
/protein_id="BAG59361.1"
/transl_table=1
/translation="MIPFWQKRQKKIASQLKSLCPMVNRLMRNLGKLHHIKLPVELAM
ERVYGGCLCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKK
ETLLAMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNS
STYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELS
PGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMF
SFEVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRV
RRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEVWD
QAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRF
NLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPT
CDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVN
IRTRDNKVHGERTISETIERLQQLKEFRSKQAEEEF"
BASE COUNT 782 a 471 c 589 g 633 t
ORIGIN
1 tggtccagcc gaggccaagt cccgggcgct agcccacctc cgacccgcct cttggctcct
61 ctcctctagg ccgtcgcttt cgggttctct catcgcttcg tcgttcgcca atgtttgagg
121 agaaggccag cagtccttca gggaagatgg gaggcgagga gaagccgatt ggtgctggtg
181 aagagaagca aaaggaagga ggcaaaaaga agaacaaaga aggatctgga gatggaggtc
241 gagctgagtt gaatccttgg cctgaatata tttacacacg tcttgagatg tataatatac
301 taaaagcaga acatgattcc attctggcag aaaaggcaga aaaagatagc aagccaatta
361 aagtcacttt gcccgatggt aaacaggttg atgcggaatc ttggaaaact acaccatatc
421 aaattgcctg tggaattagc catggaaaga gtctatggtg gatgtttatg ctacggtccg
481 ccaatagaaa atggattcta ttatgacatg tacctcgaag aagggggtgt gtctagcaat
541 gatttctctt ctctggaggc tttgtgtaag aaaatcatta aagaaaaaca agcttttgaa
601 agactggaag ttaagaaaga aactttactg gcaatgttta agtacaacaa gttcaaatgc
661 cggatattga atgaaaaggt gaatactcca actaccacag tctatagatg tggccctttg
721 atagatctct gccggggtcc tcatgttaga cacacgggca aaattaaggc tttaaaaata
781 cacaaaaatt cctccacgta ctgggaaggc aaagcagata tggagactct ccagagaatt
841 tatggcattt cattcccaga tcctaaaatg ttgaaagagt gggagaagtt ccaagaggaa
901 gctaaaaacc gagatcatag gaaaattggc agggaccaag aactatattt ctttcatgaa
961 ctcagccctg gaagttgctt ttttctgcca aaaggagcct acatttataa tgcacttatt
1021 gaattcatta ggagcgaata taggaaaaga ggattccagg aggtagtcac cccaaacatc
1081 ttcaacagcc gactctggat gacctcgggc cactggcagc actacagcga gaacatgttc
1141 tcctttgagg tggagaagga gctgtttgcc ctgaaaccca tgaactgccc aggacactgc
1201 cttatgtttg atcatcggcc aaggtcctgg cgagaactgc ctctgcggct agctgatttt
1261 ggggtacttc ataggaacga gctgtctgga gcactcacag gactcacccg ggtacgaaga
1321 ttccaacagg atgatgctca catattctgt gccatggagc agattgaaga tgaaataaaa
1381 ggttgtttgg attttctacg tacggtatat agcgtatttg gattttcttt taaactaaac
1441 ctttctactc gcccggaaaa attccttgga gatatcgaag tatgggatca agctgagaaa
1501 caacttgaaa acagtctgaa tgaatttggt gaaaagtggg agttaaactc tggagatgga
1561 gctttctatg gcccaaagat tgacatacag attaaagatg caattgggcg gtaccaccag
1621 tgtgcaacca tccagctgga tttccagttg cccatcagat ttaatcttac ttatgtaagc
1681 catgatggtg atgataagaa aaggccagtg attgttcatc gagccatctt gggatcagtg
1741 gaaagaatga ttgctatcct cacagaaaac tatgggggca aatggccctt ttggctgtcc
1801 cctcgccagg taatggtagt tccagtggga ccaacctgtg atgaatatgc ccaaaaggta
1861 cgacaacaat tccacgatgc caaattcatg gcagacattg atctggatcc aggctgtaca
1921 ttgaataaaa agattcgaaa tgcacagtta gcacagtata acttcatttt agttgttggt
1981 gaaaaagaga aaatcagtgg cactgttaat atccgcacaa gagacaataa ggtccacggg
2041 gaacgcacca tttctgaaac tatcgagcgg ctacagcagc tcaaagagtt ccgcagcaaa
2101 caggcagaag aagaatttta atgaaaaaat tacccagatt ggctccatgg aaaaggagga
2161 acagcgtttc cgtaaaattg actttgtact ctgaaaacgt caatttatat tgaacttgga
2221 ggagtttggc aaagtccgaa taggtcaacc tgcaggcgta actatttttg acctagtcag
2281 tttttaaaca atgtgcattt gaaggagtta attaaaagag agccaataaa atgattttac
2341 tcattcagta tctgagtact ggaagtgaaa catgaggaat gctttagtgt aatgtgggag
2401 aacttttttg taaatttaat gcaattgaaa aagttttcaa attcaattaa gataactaga
2461 attggattat ggtgt
//