LOCUS AK296764 2526 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52322 complete cds, highly similar to
Tyrosine-protein phosphatase non-receptortype 12 (EC 3.1.3.48).
ACCESSION AK296764
VERSION AK296764.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2526)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2526
/clone="CTONG2009397"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491388"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 234..2186
/codon_start=1
/note="highly similar to Tyrosine-protein phosphatase
non-receptortype 12 (EC 3.1.3.48)"
/protein_id="BAG59344.1"
/transl_table=1
/translation="MACREFEMGRKKCERYWPLYGEDPITFAPFKISCEDEQARTDYF
IRTLLLEFQNESRRLYQFHYVNWPDHDVPSSFDSILDMISLMRKYQEHEDVPICIHCS
AGCGRTGAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAI
AQLFEKQLQLYEIHGAQKIADGVNEINTENMISSIEPEKQDSPPPKPPRTRSCLVEGD
AKEEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDRYHPKPVLHMVSSEQHSADLN
RNYSKSTELPGKNESTIEQIDKKLERNLSFEIKKVPLQEGPKSFDGNTLLNRGHAIKI
KSASPCIADKISKPQELSSDLNVGDTSQNSCVDCSVTQSNKVSVTPPEESQNSDTPPR
PDRLPLDEKGHVTWSFHGPENAIPIPDLSEGNSSDINYQTRKTVSLTPSPATQVETPD
LVDHDNTSPLFRTPLSFTNPLHSDDSDSDERDSDGAVTQNKTNISTASATVSAATSTE
SISTRKVLPMSIARHNIAGTTHSGAEKDVDVSEDSPPPLPERTPESFVLASEHNTPVR
SEWSELQSQERSEQKKSEGLITSENEKCDHPAGGIHYEMCIECPPTFSDKREQISENP
TEATDIGFGNRCGKPKGPRDPPSEWT"
BASE COUNT 873 a 496 c 481 g 676 t
ORIGIN
1 gtgcagatcg tggctgacag aggaacgggg gtattgagcg gttaagaaga ttgtctacca
61 aatatagaac agaaaagata tatcccacag ccactggaga aaaagaagaa aatgttaaaa
121 agaacagata caaggacata ctgccatttg atcacagccg agttaaattg acattaaaga
181 ctccttcaca agattcagac tatatcaatg caaattttat aaagatcatt gtaatggcct
241 gccgagaatt tgagatggga aggaaaaaat gtgagcgcta ttggcctttg tacggagaag
301 accccataac gtttgcacca tttaaaattt cttgtgagga tgaacaagca agaacagact
361 acttcatcag gacactctta cttgaatttc aaaatgaatc tcgtaggctg tatcagtttc
421 attatgtgaa ctggccagac catgatgttc cttcatcatt tgattctatt ctggacatga
481 taagcttaat gaggaaatat caagaacatg aagatgttcc tatttgtatt cattgcagtg
541 caggctgtgg aagaacaggt gccatttgtg ccatagatta tacgtggaat ttactaaaag
601 ctgggaaaat accagaggaa tttaatgtat ttaatttaat acaagaaatg agaacacaaa
661 ggcattctgc agtacaaaca aaggagcaat atgaacttgt tcatagagct attgcccaac
721 tgtttgaaaa acagctacaa ctatatgaaa ttcatggagc tcagaaaatt gctgatggag
781 tgaatgaaat taacactgaa aacatgatca gctccataga gcctgaaaaa caagattctc
841 ctcctccaaa accaccaagg acccgcagtt gccttgttga aggggatgct aaagaagaaa
901 tactgcagcc accggaacct catccagtgc cacccatctt gacaccttct cccccttcag
961 cttttccaac agtcactact gtgtggcagg acaatgatag ataccatcca aagccagtgt
1021 tgcatatggt ttcatcagaa caacattcag cagacctcaa cagaaactat agtaaatcaa
1081 cagaacttcc agggaaaaat gaatcaacaa ttgaacagat agataaaaaa ttggaacgaa
1141 atttaagttt tgagattaag aaggtccctc tccaagaggg accaaaaagt tttgatggga
1201 acacactttt gaatagggga catgcaatta aaattaaatc tgcttcacct tgtatagctg
1261 ataaaatctc taagccacag gaattaagtt cagatctaaa tgtcggtgat acttcccaga
1321 attcttgtgt ggactgcagt gtaacacaat caaacaaagt ttcagttact ccaccagaag
1381 aatcccagaa ttcagacaca cctccaaggc cagaccgctt gcctcttgat gagaaaggac
1441 atgtaacgtg gtcatttcat ggacctgaaa atgccatacc catacctgat ttatctgaag
1501 gcaattcctc agatatcaac tatcaaacta ggaaaactgt gagtttaaca ccaagtcctg
1561 caacacaagt tgaaacacct gatcttgtgg atcatgataa cacttcacca ctcttcagaa
1621 cacccctcag ttttactaat ccacttcact ctgatgactc agactcagat gaaagagact
1681 ctgatggtgc tgtgacccag aataaaacta atatttcaac agcaagtgcc acagtttctg
1741 ctgccactag tactgaaagc atttctacta ggaaagtatt gccaatgtcc attgctagac
1801 ataatatagc aggaacaaca cattcaggtg ctgaaaaaga tgttgatgtt agtgaagatt
1861 cacctcctcc cctacctgaa agaactcctg aatcgtttgt gttagcaagt gaacataata
1921 cacctgtaag atcggaatgg agtgaacttc aaagtcagga acgatctgaa caaaaaaagt
1981 ctgaaggctt gataacctct gaaaatgaga aatgtgatca tccagcggga ggtattcact
2041 atgaaatgtg catagaatgt ccacctactt tcagtgacaa gagagaacaa atatcagaaa
2101 atccaacaga agccacagat attggttttg gtaatcgatg tggaaaaccc aaaggaccaa
2161 gagatccacc ttcagaatgg acatgattca gggagctaga agacacttta agttatactg
2221 gaaaattcag gtgccactga aagccagatt tatagtattc catctttaat atgtgggact
2281 aacagcagtg tagattgtta ccttaatatt ttttgctggg accatctacc tgccttatac
2341 tacacttagg aaaaagtatt acatatggtt tattttgaaa cttcaagtat tattgcctta
2401 atgtctctta accctgttac acgctgcttg tagacatgtt aatatagtaa tacctttatg
2461 atatattgag tttaaggact actctttttc tgttttatca tgtatgcatt attttgtata
2521 tgtaca
//