LOCUS AK296760 2832 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56480 complete cds, highly similar to Sodium
bicarbonate transporter-like protein 11.
ACCESSION AK296760
VERSION AK296760.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2832)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2832
/clone="CTONG2009160"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491384"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 54..2681
/codon_start=1
/note="highly similar to Sodium bicarbonate
transporter-like protein 11"
/protein_id="BAG59341.1"
/transl_table=1
/translation="MAAATRRVFHLQPCENSPTMSQNGYFEDSSYYKCDTDDTFEARE
EILGDEAFDTANSSIVSGESIRFFVNVNLEMQATNTENEATSGGCVLLHTSRKYLKLK
NFKEEIRAHRDLDGFLAQASIVLNETATSLDNVLRTMLRRFARDPDNNEPNCNLDLLM
AMLFTDAGAPMRGKVHLLSDTIQGVTATVTGVRYQQSWLCIICTMKALQKRHVCISRL
VRPQNWGENSCEVRFVILVLAPPKMKSTKTAMEVARTFATMFSDIAFRQKLLETRTEE
EFKEALVHQRQLLTMVSHGPVAPRTKERSTVSLPAHRHPEPPKCKDFVPFGKGIREDI
ARRFPLYPLDFTDGIIGKNKAVGKYITTTLFLYFACLLPTIAFGSLNDENTDGAIDVQ
KTIAGQSIGGLLYALFSGQPLVILLTTAPLALYIQVIRVICDDYDLDFNSFYAWTGLW
NSFFLALYAFFNLSLVMSLFKRSTEEIIALFISITFVLDAVKGTVKIFWKYYYGHYLD
DYHTKRTSSLVSLSGLGASLNASLHTALNASFLASPTELPSATHSGQATAVPSLLIML
GTLWLGYTLYQFKKSPYLHPCVREILSDCALPIAVLAFSLISSHGFREIEMSKFRYNP
SESPFAMAQIQSLSLRAVSGAMGLGFLLSMLFFIEQNLVAALVNAPENRLVKGTAYHW
DLLLLAIINTGLSLFGLPWIHAAYPHSPLHVRALALVEERVENGHIYDTIVNVKETRL
TSLGASVLVGLSLLLLPVPLQWIPKPVLYGLFLYIALTSLDGNQLVQRVALLLKEQTA
YPPTHYIRRVPQRKIHYFTDLQVLQLLLLCAFGMSSLPYMKMIFPLIMIAMIPIRYIL
LPRIIEAKYLDVMDAEHRP"
BASE COUNT 554 a 926 c 762 g 590 t
ORIGIN
1 agaagcgccg gagcgccgcg tgaggagccc ggccgtgagt gcgcgagtgt gccatggccg
61 cggccaccag gcgcgtgttc catctgcagc cgtgcgaaaa ctctcccacc atgtcgcaga
121 atggatactt cgaggattca agctactaca agtgtgacac agatgacacc ttcgaagccc
181 gagaggagat cctgggggat gaggccttcg acactgccaa ctcctccatc gtgtctggcg
241 agagtatccg tttttttgtc aatgtcaacc ttgagatgca ggccaccaac actgagaatg
301 aagcgacttc cggtggctgt gtgctcctgc acacctcccg aaagtacctg aagttaaaga
361 acttcaagga agagatccgt gcgcaccgcg acctagatgg cttcctggcg caggccagca
421 tcgtcctgaa cgagacggcc acctccctgg ataacgtgct gcggaccatg cttcgccgct
481 tcgccaggga ccctgacaac aatgagccca actgcaacct ggacctgctc atggccatgc
541 tcttcaccga tgccggggca cccatgcggg gtaaagtcca cctgctgtca gataccatcc
601 aaggggtcac cgccacagtg acaggggtgc ggtaccagca gtcatggctc tgcatcatct
661 gtaccatgaa ggccctacag aagcggcacg tgtgcatcag ccgcctggtt cgcccacaga
721 actgggggga gaattcctgt gaggttcggt tcgtcatcct ggtgctggcc ccacccaaga
781 tgaaaagcac taagactgcg atggaggtgg cgcgcacgtt tgccaccatg ttctcggata
841 tcgccttccg ccagaagctc ctggagaccc gcacagagga ggaattcaag gaggccttgg
901 tgcatcagag acagctgctc accatggtga gccacggtcc agtggcgccg agaacgaagg
961 aacgcagcac agtctccctc cctgcccaca gacacccaga gcccccaaag tgcaaggact
1021 ttgtcccttt tgggaagggc atccgggagg acatcgcacg caggttcccc ttgtacccct
1081 tggacttcac tgatggcatt attgggaaaa acaaggctgt gggcaaatac atcaccacca
1141 ccctgttcct ctacttcgcc tgcctcctgc ccaccatcgc tttcgggtct ctcaatgacg
1201 agaacacaga cggggccatc gacgtgcaga agaccatagc cgggcagagc atcgggggcc
1261 tgctctacgc gctcttctct gggcagccat tggtgattct gctgaccacc gcgcccctgg
1321 cgctctacat ccaggtgatt cgtgtcatct gtgatgacta tgacctggac ttcaactcct
1381 tctacgcatg gacgggcctg tggaatagtt tcttccttgc gctttatgcc tttttcaacc
1441 tcagcctggt catgagtctc ttcaagaggt cgacggagga gatcatcgcc ctcttcattt
1501 ccatcacgtt tgtgctggat gccgtcaagg gcacggttaa aatcttctgg aagtactact
1561 atgggcatta cttggacgac tatcacacaa aaaggacttc atcccttgtc agcctgtcag
1621 gcctcggcgc cagcctcaac gccagcctcc acactgccct caacgccagc ttcctcgcca
1681 gccccacgga gctgccctcg gccacacact caggccaggc gaccgccgtg cccagcctcc
1741 tcatcatgct gggcacgctc tggctgggct acaccctcta ccaattcaag aagagcccct
1801 acctgcaccc ctgcgtgcga gagatcctgt ccgactgcgc cctgcccatc gcggtgctcg
1861 ccttctccct catcagctcc catggcttcc gggaaatcga gatgagcaag ttccgctaca
1921 accccagcga gagccccttt gcgatggcgc agatccagtc gctgtccctg agggccgtca
1981 gcggtgccat gggcctcggc ttcctgctgt ccatgctctt cttcatcgag cagaacttgg
2041 tggccgcctt ggtgaatgca ccggagaaca ggctggtgaa gggcactgcc taccactggg
2101 acctcctgct cctcgccatc atcaacacag ggctgtctct gtttgggctg ccttggatcc
2161 atgccgccta cccccactcc ccgctgcacg tgcgagccct ggccttagtg gaggagcgtg
2221 tggagaacgg acacatctat gacacgattg tgaacgtgaa ggagacgcgg ctgacctcgc
2281 tgggcgccag cgtcctggtg ggcctgtccc tgttgctgct gccggtcccg cttcagtgga
2341 tccccaagcc cgtgctctat ggcctcttcc tctacatcgc gctcacctcc ctcgatggca
2401 accagctcgt ccagcgcgtg gccctgctgc tcaaggagca gactgcgtac cccccgacac
2461 actacatccg gagggtgccc cagaggaaga tccactactt cacggacctg caggtgcttc
2521 agctgctgct gctgtgtgcc ttcggcatga gctccctgcc ctacatgaag atgatctttc
2581 ccctcatcat gatcgccatg atccccatcc gctatatcct gctgccccga atcattgaag
2641 ccaagtactt ggatgtcatg gacgctgagc acaggccttg actggcagac cctgcccacg
2701 ccccattcgc cagccctcca cgtcctccca ggctggctct ggagctgtga ggggaggtgt
2761 aggtgtgtgg gtgactgctc tgtgctgcgc cttctcatgg ctgactcagg cctggggcat
2821 ctgggcattg ta
//