LOCUS AK296757 2221 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56387 complete cds, highly similar to Mus
musculus armadillo repeat containing 8 (Armc8), mRNA.
ACCESSION AK296757
VERSION AK296757.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2221)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2221
/clone="CTONG2008649"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491381"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 39..1859
/codon_start=1
/note="highly similar to Mus musculus armadillo repeat
containing 8 (Armc8), mRNA"
/protein_id="BAH12427.1"
/transl_table=1
/translation="MACLLETPIRMSVLSEVTASSRHYVDRLFDPDPQKVLQGVIDMK
NAVIGNNKQKANLIVLGAVPRLLYLLQQETSSTELKTECAVVLGSLAMGTENNVKSLL
DCHIIPALLQGLLSPDLKFIEACLRCLRTIFTSPVTPEELLYTDATVIPHLMALLSRS
RYTQEYICQIFSHCCKGPDHQTILFNHGAVQNIAHLLTSLSYKVRMQALKCFSVLAFE
NPQVSMTLVNVLVDGELLPQIFVKMLQRDKPIEMQLTSAKCLTYMCRAGAIRTDDNCI
VLKLDHDLKHAHELRQAAFKLYASLGANDEDIRKKIIETENMMDRIVTGLSESSVKVR
LAAVRCLHSLSRSVQQLRTSFQDHAVWKPLMKVLQNAPDEILVVASSMLCNLLLEFSP
SKEPILESGAVELLCGLTQSENPALRVNGIWALMNMAFQAEQKIKADILRSLSTEQLF
RLLSDSDLNVLMKTLGLLRNLLSTRPHIDKIMSTHGKQIMQAVTLILEGEHNIEVKEQ
TLCILANIADGTTAKDLIMTNDDILQKIKYYMGHSHVKLQLAAMFCISNLIWNEEEGS
QERQDKLRDMGIVDILHKLSQSPDSNLCDKAKMALQQYLA"
BASE COUNT 639 a 471 c 487 g 624 t
ORIGIN
1 gcgccggcgc ctgcagcagc cgggtgggaa ggctcaagat ggcgtgcttg ttggagaccc
61 caatccgcat gagcgtcctt tcggaagtaa cagctagcag tcgccactat gttgacaggc
121 tatttgaccc tgatccccag aaagttctac aaggtgtcat agacatgaaa aatgctgtaa
181 ttggaaacaa caagcagaaa gccaatctca ttgttttagg agctgttcca agattgttgt
241 acttgcttca gcaagaaacc tcaagcacag agctgaaaac tgaatgtgca gtggtgttgg
301 gaagtcttgc tatgggtact gaaaacaatg tcaagtctct actggactgc catattatcc
361 ctgccttatt gcaaggacta ctgtccccag acctgaagtt tattgaagct tgcctccgat
421 gcctgcgtac catcttcacc agtcctgtca ctccagagga gctactgtat acagatgcca
481 cagtgatacc acacctcatg gcactgctta gcaggtcccg ctatacccag gagtacatct
541 gtcagatctt ctcacactgc tgtaaagggc cagatcatca aacaattcta tttaaccacg
601 gtgcagttca gaatattgct cacctactaa cctcactgtc ctacaaagtt cgaatgcaag
661 cactgaaatg tttctcagtt ttagcttttg aaaaccccca ggtatcgatg accctggtaa
721 atgttttggt tgatggagaa ttgttaccac agatttttgt gaagatgtta cagagggata
781 agcctattga gatgcagctc acatcagcaa aatgtttaac ttacatgtgt agagctggag
841 caattcggac agatgataac tgtattgtat taaagcttga tcatgattta aaacatgctc
901 acgaactccg ccaggctgca ttcaagctct atgcctctct tggagcaaat gatgaagaca
961 tccggaagaa gatcattgag actgaaaata tgatggaccg aattgtgact ggcttgtctg
1021 agtctagtgt caaggtgcgg ttagctgccg tcagatgttt gcacagttta tccagatctg
1081 tgcagcagct tcgaaccagt ttccaggatc atgctgtttg gaaaccttta atgaaggttt
1141 tacaaaatgc accagatgaa atcctagtgg tagcatcttc catgctgtgt aatcttcttc
1201 ttgaattttc tccaagcaaa gagccaattt tggaatcagg agccgtagag ctactttgtg
1261 gattaactca gagtgaaaat cctgctttac gagtgaatgg aatttgggct ttaatgaata
1321 tggcatttca ggctgaacaa aaaataaaag cagatatttt acgaagcttg agtactgaac
1381 agctattccg gttattatca gattcagatt tgaatgtgct gatgaagaca ttgggacttc
1441 ttagaaatct cctctccact cgtcctcata tagataaaat aatgagtact catggaaagc
1501 aaattatgca agccgtcact cttattctag aaggggaaca taacattgag gtcaaagagc
1561 agacactgtg catcttagcc aacatagcgg atgggacaac agcaaaagat cttattatga
1621 ccaatgatga tatcctacag aaaatcaagt attacatggg ccattcacat gttaaactgc
1681 agcttgcagc catgttttgt atatcaaacc tcatatggaa tgaagaggaa ggttcacaag
1741 aacgccagga taaattacga gacatgggca tcgtagatat tctacacaaa ctgagtcagt
1801 caccagattc aaacctttgt gacaaggcaa agatggcact gcagcagtac ctggcatgat
1861 gggagtgccc ctgggcacct gcgagcatcc cacctccttg tttaaggaag tacaggaacc
1921 agcctcattt gattccttct atttgcacaa gtcaccttgg actgcaggga gctgttttgc
1981 aaaagcagtt tagtaggctt agatctcaaa ttcatcttga gaacattttt ttgaggtagt
2041 aatttcctca gaagactctt gtgttttgtt ttggtttttt tttctgagct actcggactc
2101 tttattagaa caatcaatca ctttcctttg gacctacaat ttttgcctat gctgcagcca
2161 ctttgtgagt gagaatgaat atgtctgtgt gaacacacag gcatgcgtgt gtatgtgcac
2221 g
//