LOCUS AK296724 1753 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ58508 complete cds, highly similar to Transcription factor SOX-7. ACCESSION AK296724 VERSION AK296724.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1753) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1753 /clone="CTONG2005465" /clone_lib="CTONG2" /db_xref="H-InvDB:HIT000491348" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="tumor tissue" /organism="Homo sapiens" /tissue_type="tongue, tumor tissue" CDS 92..1414 /codon_start=1 /note="highly similar to Transcription factor SOX-7" /protein_id="BAG59312.1" /transl_table=1 /translation="MSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKG LGAQEQGATDHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDS SDKKEKKSFSLEEKSKISKNRVHYMKFTKGKSWKALTLSQKRPYVDEAERLRLQHMQD YPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYS PGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPC QEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPA YYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPG HPDSATGAMALSGHVPVSQVTPTGPTETSLISVLADATATYYNSYSVS" BASE COUNT 372 a 581 c 474 g 326 t ORIGIN 1 tacgcacgtc ctgattctcc tggagtctcc agcccgccca gtggccgcag tcacccaggt 61 ccagaggcgg cggtatcaca ggctctccga catgtctatg ctggctgaac gtcggcggaa 121 gcagaagtgg gctgtggatc ctcagaacac tgcctggagt aatgacgatt ccaagtttgg 181 ccagcggatg ctagagaaga tggggtggtc taaaggaaag ggtttagggg ctcaggagca 241 aggagccaca gatcatatta aagttcaagt gaaaaataac cacctgggac tcggagctac 301 catcaataat gaagacaact ggattgccca tcaggatgat tttaaccagc ttctggccga 361 actgaacact tgccatgggc aggaaaccac agattcctcg gacaagaagg aaaagaaatc 421 ttttagcctt gaggaaaagt ccaaaatctc caaaaaccgt gttcactata tgaaattcac 481 aaaaggaaag tcgtggaagg cgctgacgct gtcccagaag aggccgtacg tggacgaggc 541 ggagcggctg cgcctgcagc acatgcagga ctaccccaac tacaagtacc ggccgcgcag 601 gaagaagcag gccaagcggc tgtgcaagcg cgtggacccg ggcttccttc tgagctccct 661 ctcccgggac cagaacgccc tgccggagaa gagaagcggc agccgggggg cgctggggga 721 gaaggaggac aggggtgagt actcccccgg cactgccctg cccagcctcc ggggctgcta 781 ccacgagggg ccggctggtg gtggcggcgg cggcaccccg agcagtgtgg acacgtaccc 841 gtacgggctg cccacacctc ctgaaatgtc tcccctggac gtgctggagc cggagcagac 901 cttcttctcc tccccctgcc aggaggagca tggccatccc cgccgcatcc cccacctgcc 961 agggcacccg tactcaccgg agtacgcccc aagccctctc cactgtagcc accccctggg 1021 ctccctggcc cttggccagt cccccggcgt ctccatgatg tcccctgtac ccggctgtcc 1081 cccatctcct gcctattact ccccggccac ctaccaccca ctccactcca acctccaagc 1141 ccacctgggc cagctttccc cgcctcctga gcaccctggc ttcgacgccc tggatcaact 1201 gagccaggtg gaactcctgg gggacatgga tcgcaatgaa ttcgaccagt atttgaacac 1261 tcctggccac ccagactccg ccacaggggc catggccctc agtgggcatg ttccggtctc 1321 ccaggtgaca ccaacgggtc ccacagagac cagcctcatc tccgtcctgg ctgatgccac 1381 ggccacgtac tacaacagct acagtgtgtc atagagctgg aggcgccccg tccggtcagc 1441 cctcgcgccc tctccttcct gtgccttgag tggcagagga gccgtccagc cacaccagct 1501 ttcctcccac cgctcagggc agggaggtct gaactgcggc cccagagcct ttggcctaag 1561 ctggactctc cttatccgag tgccgcctct atccccttcc ccacgttcca gcccctgcag 1621 cccacatttt aagtatattc cttcaagtga gttttcctcc agcccctgag agttgctgtc 1681 tcccagtgga atgttcactg acgtcttttc ttggtagcca tcatcgaaac taatgggggg 1741 acagacttga tag //