LOCUS AK296706 1861 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ60645 complete cds, highly similar to Homo
sapiens aryl hydrocarbon receptor nuclear translocator-like 2
(ARNTL2), mRNA.
ACCESSION AK296706
VERSION AK296706.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1861)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1861
/clone="CTONG2003666"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491330"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 154..1776
/codon_start=1
/note="highly similar to Homo sapiens aryl hydrocarbon
receptor nuclear translocator-like 2 (ARNTL2), mRNA"
/protein_id="BAH12415.1"
/transl_table=1
/translation="MAAEEEAAAGGEVAGGEATAPGKVLREENQCIAPVVSSRVSPGT
RPTAMGSFSSHMTEFPRKRKGSDSDPSQEAHSQTEKRRRDKMNNLIEELSAMIPQCNP
MARKLDKLTVLRMAVQHLRSLKGLTNSYVGSNYGPSFLQDNELRHLILKTAEGFLFVV
GCERGKILFVSKSVSKILNYDQASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLI
DAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIKSCKISVKEEHGCLPNSRKKEHRKFYT
IHCTGYLRSWPPNIVGMEEERNSKKDNSNFTCLVAIGRLQPYIVPQNSGEINVKPTEF
ITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEK
ILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVLGHSEPGEASFLPCS
SQSSEESSRQSCMSVPGMSTGTVLGAGSIGTDIANEILDLQRLQSSSYLDDSSPTGLM
KDTHTVNCRSVMVHSWISMPYVTMMTQPWLHL"
BASE COUNT 548 a 381 c 453 g 479 t
ORIGIN
1 gggctgcggt ggcggccgcc gcggcacccg gcagggcccg ccagtccccg cttccctgct
61 ccagagccgc cgcctgggcc ggggcagggc gggcccgggg ctcctccatg ctgccagccg
121 cggggctgcg gagccgacca agtggctcct gcgatggcgg cggaagagga ggctgcggcg
181 ggaggtgagg ttgccggtgg cgaggcgacg gccccaggta aagtgttgag agaggagaac
241 cagtgcattg ctcctgtggt ttccagccgc gtgagtccag ggacaagacc aacagctatg
301 gggtctttca gctcacacat gacagagttt ccacgaaaac gcaaaggaag tgattcagac
361 ccatcccaag aagctcatag ccaaactgaa aagcggagga gagataaaat gaataacctg
421 attgaagaac tgtctgcaat gatccctcag tgcaacccca tggcgcgtaa actggacaaa
481 cttacagttt taagaatggc tgttcaacac ttgagatctt taaaaggctt gacaaattct
541 tatgtgggaa gtaattatgg accatcattt cttcaggata atgagctcag acatttaatc
601 cttaagactg cagaaggctt cttatttgtg gttggatgtg aaagaggaaa aattctcttc
661 gtttctaagt cagtctccaa aatacttaat tatgatcagg ctagtttgac tggacaaagc
721 ttatttgact tcttacatcc aaaagatgtt gccaaagtaa aggaacaact ttcttctttt
781 gatatttcac caagagaaaa gctaatagat gccaaaactg gtttgcaagt tcacagtaat
841 ctccacgctg gaaggacacg tgtgtattct ggctcaagac gatctttttt ctgtcggata
901 aagagttgta aaatctctgt caaagaagag catggatgct tacccaactc aaggaagaaa
961 gagcacagaa aattctatac tatccattgc actggttact tgagaagctg gcctccaaat
1021 attgttggaa tggaagaaga aaggaacagt aagaaagaca acagtaattt tacctgcctt
1081 gtggccattg gaagattaca gccatatatt gttccacaga acagtggaga gattaatgtg
1141 aaaccaactg aatttataac ccggtttgca gtgaatggaa aatttgtcta tgtagatcaa
1201 agggcaacag cgattttagg atatctgcct caggaacttt tgggaacttc ttgttatgaa
1261 tattttcatc aagatgacca caataatttg actgacaagc acaaagcagt tctacagagt
1321 aaggagaaaa tacttacaga ttcctacaaa ttcagagcaa aagatggctc ttttgtaact
1381 ttaaaaagcc aatggtttag tttcacaaat ccttggacaa aagaactgga atatattgta
1441 tctgtcaaca ctttagtttt gggacatagt gagcctggag aagcatcatt tttaccttgt
1501 agctctcaat catcagaaga atcctctaga cagtcctgta tgagtgtacc tggaatgtct
1561 actggaacag tacttggtgc tggtagtatt ggaacagata ttgcaaatga aattctggat
1621 ttacagaggt tacagtcttc ttcatacctt gatgattcga gtccaacagg tttaatgaaa
1681 gatactcata ctgtaaactg caggagtgtg atggtgcaca gttggatttc gatgccctat
1741 gtgacaatga tgacacagcc atggctgcat ttatgaatta cttagaagca gaggggggcc
1801 tgggagaccc tggggacttc agtgacatcc agtggaccct ctagcctttg atttttaact
1861 c
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