LOCUS AK296696 1762 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57121 complete cds, highly similar to
Heterogeneous nuclear ribonucleoprotein F.
ACCESSION AK296696
VERSION AK296696.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1762)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1762
/clone="CTONG2002345"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491320"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 417..1433
/codon_start=1
/note="highly similar to Heterogeneous nuclear
ribonucleoprotein F"
/protein_id="BAG59290.1"
/transl_table=1
/translation="MGHRYIEVFKSHRTEMDWVLKHSGPNSADSANDGFVRLRGLPFG
CTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHR
YIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRPGAYS
TGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQSTTGHCVHMRG
LPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQ
HRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYSGLESQSVSGCYGAGYSGQNSM
GGYD"
BASE COUNT 447 a 417 c 489 g 409 t
ORIGIN
1 cttgcgtcct tccggctccg tcgtggaagc aggactgcgc cgcgtcttcc tcaaggttga
61 gaacaaaaac atgcacctgg agtttccccg gagccctctg cgtggttgag cttcggtgga
121 atttcggggc tcttggctgc cagccgcgct tgcctggtag caacagaaac cagtcctgct
181 cgcctccgtg gacatttcat taccatccag aagtgtctcc cactgaaggc atccgtggtt
241 gtttttaagc cacaaaaaag ccacacccaa gatcacctga cacccaccct gacaagtgtc
301 catgatgctg ggccctgagg gaggtgaagg ctttgtggtc aagctccgtg gcctgccctg
361 gtcctgctct gttgaggacg tgcagaactt cctctctgaa aaaagacagg gaaagcatgg
421 gacaccggta cattgaggtg ttcaagtccc acagaaccga gatggattgg gtgttgaagc
481 acagtggtcc caacagtgcc gacagcgcca acgatggctt cgtgcggctt cgaggactcc
541 catttggatg cacaaaggaa gaaattgttc agttcttctc agggttggaa attgtgccaa
601 acgggatcac attgcctgtg gaccccgaag gcaagattac aggggaagcg ttcgtgcagt
661 ttgcctcgca ggagttagct gagaaggctc tagggaaaca caaggagagg atagggcaca
721 ggtacattga ggtgtttaag agcagccagg aggaagttag gtcatactca gatccccctc
781 tgaagttcat gtccgtgcag cggccagggc cctatgaccg gcccgggact gccaggaggt
841 acattggcat cgtgaagcag gcaggcctgg aaaggatgag gcctggtgcc tacagcacag
901 gctacggggg ctacgaggag tacagtggcc tcagtgatgg ctacggcttc accaccgacc
961 tgttcgggag agacctcagc tactgtctct ccggaatgta tgaccacaga tacggcgaca
1021 gtgagttcac agtgcagagc accacaggcc actgtgtcca catgaggggc ctgccgtaca
1081 aagcgaccga gaacgacatt tacaacttct tctctcctct caaccctgtg agagtccata
1141 ttgagattgg cccagatgga agagtgacgg gtgaagcaga tgttgagttt gctactcatg
1201 aagaagctgt ggcagctatg tccaaagaca gggccaatat gcagcacaga tatatagaac
1261 tcttcttgaa ttcaacaaca ggggccagca atggggcgta tagcagccag gtgatgcaag
1321 gcatgggggt gtctgctgcc caggccactt acagtggcct ggagagccag tcagtgagtg
1381 gctgttacgg ggccggctac agtgggcaga acagcatggg tggctatgac tagttttgtt
1441 aggaacattt gagttacttc aatcattttc acaggcagcc aacaagcaat taagagcagt
1501 tataatagag gacgctgggg gacccatttt gcaccatgag tttgtgaaaa atctggatta
1561 aaaaattacc tcttcagtgt tttctcatgc aaaattttct tctagcatgt gataatgagt
1621 aaactaaaac tattttcagc ttttctcaat taacattttg gtagtatact tcagagtgat
1681 gttatctaag tttaagtagt ttaagtatgt taaatgtgga tcttttacac cacatcacag
1741 tgaacacact ggggagacgt gc
//