LOCUS AK296693 2439 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55702 complete cds, highly similar to
Semaphorin-4A precursor.
ACCESSION AK296693
VERSION AK296693.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2439)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2439
/clone="CTONG2002126"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491317"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 270..2258
/codon_start=1
/note="highly similar to Semaphorin-4A precursor"
/protein_id="BAG59287.1"
/transl_table=1
/translation="MIPWPASDRKKSECAFKKKSNETQCFNFIRVLVSYNVTHLYTCG
TFAFSPACTFIELQDSYLLPISEDKVMEGKGQSPFDPAHKHTAVLVDGMLYSGTMNNF
LGSEPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDFFER
LHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPFNVIRHAVLLPADSPTA
PHIYAVFTSQWQVGGTRSSAVCAFSLLDIERVFKGKYKELNKETSRWTTYRGPETNPR
PGSCSVGPSSDKALTFMKDHFLMDEQVVGTPLLVKSGVEYTRLAVETAQGLDGHSHLV
MYLGTTTGSLHKAVVSGDSSAHLVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWR
VPRANCSVYESCVDCVLARDPHCAWDPESRTCCLLSAPNLNSWKQDMERGNPEWACAS
GPMSRSLRPQSRPQIIKEVLAVPNSILELPCPHLSALASYYWSHGPAAVPEASSTVYN
GSLLLIVQDGVGGLYQCWATENGFSYPVISYWVDSQDQTLALDPELAGIPREHVKVPL
TRVSGGAALAAQQSYWPHFVTVTVLFALVLSGALIILVASPLRALRARGKVQGCETLR
PGEKAPLSREQHLQSPKECRTSASDVDADNNCLGTEVA"
BASE COUNT 487 a 758 c 666 g 528 t
ORIGIN
1 acaactcgag aggtggaaat tccggtttcc ctggcctaga gctcccagtg ctggctttgg
61 catgatgggc acctggaggg ccgcactccc gttccagcca ggctgagcct tctgtcccct
121 gcctctgggg cctgggaacc ccccttcttc tttctcctga atggcacccc cgccctagaa
181 tccagacacc gagtttccca ctgtggctgg ttcaaggagc tccctggtga cagtctgtgg
241 ctgagcatgg ccctcccagg ctaaagaaca tgataccgtg gccagccagt gacagaaaaa
301 agagtgaatg tgcctttaag aagaagagca atgagacaca gtgtttcaac ttcatccgtg
361 tcctggtttc ttacaatgtc acccatctct acacctgcgg caccttcgcc ttcagccctg
421 cttgtacctt cattgaactt caagattcct acctgttgcc catctcggag gacaaggtca
481 tggagggaaa aggccaaagc ccctttgacc ccgctcacaa gcatacggct gtcttggtgg
541 atgggatgct ctattctggt actatgaaca acttcctggg cagtgagccc atcctgatgc
601 gcacactggg atcccagcct gtcctcaaga ccgacaactt cctccgctgg ctgcatcatg
661 acgcctcctt tgtggcagcc atcccttcga cccaggtcgt ctacttcttc ttcgaggaga
721 cagccagcga gtttgacttc tttgagaggc tccacacatc gcgggtggct agagtctgca
781 agaatgacgt gggcggcgaa aagctgctgc agaagaagtg gaccaccttc ctgaaggccc
841 agctgctctg cacccagccg gggcagctgc ccttcaacgt catccgccac gcggtcctgc
901 tccccgccga ttctcccaca gctccccaca tctacgcagt cttcacctcc cagtggcagg
961 ttggcgggac caggagctct gcggtttgtg ccttctctct cttggacatt gaacgtgtct
1021 ttaaggggaa atacaaagag ttgaacaaag aaacttcacg ctggactact tataggggcc
1081 ctgagaccaa cccccggcca ggcagttgct cagtgggccc ctcctctgat aaggccctga
1141 ccttcatgaa ggaccatttc ctgatggatg agcaagtggt ggggacgccc ctgctggtga
1201 aatctggcgt ggagtataca cggcttgcag tggagacagc ccagggcctt gatgggcaca
1261 gccatcttgt catgtacctg ggaaccacca cagggtcgct ccacaaggct gtggtaagtg
1321 gggacagcag tgctcatctg gtggaagaga ttcagctgtt ccctgaccct gaacctgttc
1381 gcaacctgca gctggccccc acccagggtg cagtgtttgt aggcttctca ggaggtgtct
1441 ggagggtgcc ccgagccaac tgtagtgtct atgagagctg tgtggactgt gtccttgccc
1501 gggaccccca ctgtgcctgg gaccctgagt cccgaacctg ttgcctcctg tctgccccca
1561 acctgaactc ctggaagcag gacatggagc gggggaaccc agagtgggca tgtgccagtg
1621 gccccatgag caggagcctt cggcctcaga gccgcccgca aatcattaaa gaagtcctgg
1681 ctgtccccaa ctccatcctg gagctcccct gcccccacct gtcagccttg gcctcttatt
1741 attggagtca tggcccagca gcagtcccag aagcctcttc cactgtctac aatggctccc
1801 tcttgctgat agtgcaggat ggagttgggg gtctctacca gtgctgggca actgagaatg
1861 gcttttcata ccctgtgatc tcctactggg tggacagcca ggaccagacc ctggccctgg
1921 atcctgaact ggcaggcatc ccccgggagc atgtgaaggt cccgttgacc agggtcagtg
1981 gtggggccgc cctggctgcc cagcagtcct actggcccca ctttgtcact gtcactgtcc
2041 tctttgcctt agtgctttca ggagccctca tcatcctcgt ggcctcccca ttgagagcac
2101 tccgggctcg gggcaaggtt cagggctgtg agaccctgcg ccctggggag aaggccccgt
2161 taagcagaga gcaacacctc cagtctccca aggaatgcag gacctctgcc agtgatgtgg
2221 acgctgacaa caactgccta ggcactgagg tagcttaaac tctaggcaca ggccggggct
2281 gcggtgcagg cacctggcca tgctggctgg gcggcccaag cacagccctg actaggatga
2341 cagcagcaca aaagaccacc tttctcccct gagaggagct tctgctactc tgcatcactg
2401 atgacactca gcagggtgat gcacagcagt ctgcctccc
//