LOCUS AK296692 2483 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55701 complete cds, highly similar to Vascular cell adhesion protein 1 precursor. ACCESSION AK296692 VERSION AK296692.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2483) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2483 /clone="CTONG2001729" /clone_lib="CTONG2" /db_xref="H-InvDB:HIT000491316" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="tumor tissue" /organism="Homo sapiens" /tissue_type="tongue, tumor tissue" CDS 120..2153 /codon_start=1 /note="highly similar to Vascular cell adhesion protein 1 precursor" /protein_id="BAG59286.1" /transl_table=1 /translation="MPGKMVVILGASNILWIMFAASQAFKIETTPESRYLAQIGDSVS LTCSTTGSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEF LEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYIS PKNTVISVNPSTKLQEGGSVTMTCSSEGLPAPEIFWSKKLDNGNLQHLSGNATLTLIA MRMEDSGIYVCEGVNLIGKNRKEVELIVQEKPFTVEISPGPRIAAQIGDSVMLTCSVM GCESPSFSWRTQIDSPLSGKVRSEGTNSTLTLSPVSFENEHSYLCTVTCGHKKLEKGI QVELYSFPRDPEIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELLKGETILENIEFLE DTDMKSLENKSLEMTFIPTIEDTGKALVCQAKLHIDDMEFEPKQRQSTQTLYVNVAPR DTTVLVSPSSILEEGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTK MEDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNV PETWIILKKKAETGDTVLKSIDGAYTIRKAQLKDAGVYECESKNKVGSQLRSLTLDVQ GRENNKDYFSPELLVLYFASSLIIPAIGMIIYFARKANMKGPYSLVEAQKSKV" BASE COUNT 764 a 497 c 569 g 653 t ORIGIN 1 gcggtatctg catcgggcct cactggcttc aggagctgaa taccctccca ggcacacaca 61 ggtgggacac aaataagggt tttggaacca ctattttctc atcacgacag caacttaaaa 121 tgcctgggaa gatggtcgtg atccttggag cctcaaatat actttggata atgtttgcag 181 cttctcaagc ttttaaaatc gagaccaccc cagaatctag atatcttgct cagattggtg 241 actccgtctc attgacttgc agcaccacag gctcttttcc taaggatcca gagattcatt 301 tgagtggccc tctggaggct gggaagccga tcacagtcaa gtgttcagtt gctgatgtat 361 acccatttga caggctggag atagacttac tgaaaggaga tcatctcatg aagagtcagg 421 aatttctgga ggatgcagac aggaagtccc tggaaaccaa gagtttggaa gtaaccttta 481 ctcctgtcat tgaggatatt ggaaaagttc ttgtttgccg agctaaatta cacattgatg 541 aaatggattc tgtgcccaca gtaaggcagg ctgtaaaaga attgcaagtc tacatatcac 601 ccaagaatac agttatttct gtgaatccat ccacaaagct gcaagaaggt ggctctgtga 661 ccatgacctg ttccagcgag ggtctaccag ctccagagat tttctggagt aagaaattag 721 ataatgggaa tctacagcac ctttctggaa atgcaactct caccttaatt gctatgagga 781 tggaagattc tggaatttat gtgtgtgaag gagttaattt gattgggaaa aacagaaaag 841 aggtggaatt aattgttcaa gagaaaccat ttactgttga gatctcccct ggaccccgga 901 ttgctgctca gattggagac tcagtcatgt tgacatgtag tgtcatgggc tgtgaatccc 961 catctttctc ctggagaacc cagatagaca gccctctgag cgggaaggtg aggagtgagg 1021 ggaccaattc cacgctgacc ctgagccctg tgagttttga gaacgaacac tcttatctgt 1081 gcacagtgac ttgtggacat aagaaactgg aaaagggaat ccaggtggag ctctactcat 1141 tccctagaga tccagaaatc gagatgagtg gtggcctcgt gaatgggagc tctgtcactg 1201 taagctgcaa ggttcctagc gtgtaccccc ttgaccggct ggagattgaa ttacttaagg 1261 gggagactat tctggagaat atagagtttt tggaggatac ggatatgaaa tctctagaga 1321 acaaaagttt ggaaatgacc ttcatcccta ccattgaaga tactggaaaa gctcttgttt 1381 gtcaggctaa gttacatatt gatgacatgg aattcgaacc caaacaaagg cagagtacgc 1441 aaacacttta tgtcaatgtt gcccccagag atacaaccgt cttggtcagc ccttcctcca 1501 tcctggagga aggcagttct gtgaatatga catgcttgag ccagggcttt cctgctccga 1561 aaatcctgtg gagcaggcag ctccctaacg gggagctaca gcctctttct gagaatgcaa 1621 ctctcacctt aatttctaca aaaatggaag attctggggt ttatttatgt gaaggaatta 1681 accaggctgg aagaagcaga aaggaagtgg aattaattat ccaagttact ccaaaagaca 1741 taaaacttac agcttttcct tctgagagtg tcaaagaagg agacactgtc atcatctctt 1801 gtacatgtgg aaatgttcca gaaacatgga taatcctgaa gaaaaaagcg gagacaggag 1861 acacagtact aaaatctata gatggcgcct ataccatccg aaaggcccag ttgaaggatg 1921 cgggagtata tgaatgtgaa tctaaaaaca aagttggctc acaattaaga agtttaacac 1981 ttgatgttca aggaagagaa aacaacaaag actatttttc tcctgagctt ctcgtgctct 2041 attttgcatc ctccttaata atacctgcca ttggaatgat aatttacttt gcaagaaaag 2101 ccaacatgaa ggggccatat agtcttgtag aagcacagaa atcaaaagtg tagctaatgc 2161 ttgatatgtt caactggaga cactatttat ctgtgcaaat ccttgatact gctcatcatt 2221 ccttgagaaa aacaatgagc tgagaggcag acttccctga atgtattgaa cttggaaaga 2281 aatgcccatc tatgtccctt gctgtgagca agaagtcaaa gtaaaacttg ctgcctgaag 2341 aacagtaact gccatcaaga tgagagaact ggaggagttc cttgatctgt atatacaata 2401 acataatttg tacatatgta aaataaaatt atgccatagc aagattgctt aaaatagcaa 2461 cactctatat ttagattgtt aaa //