LOCUS AK296681 3862 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60643 complete cds, highly similar to
Myosin-binding protein C, slow-type.
ACCESSION AK296681
VERSION AK296681.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3862)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3862
/clone="CTONG1000639"
/clone_lib="CTONG1"
/db_xref="H-InvDB:HIT000491305"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 105..3626
/codon_start=1
/note="highly similar to Myosin-binding protein C,
slow-type"
/protein_id="BAG59277.1"
/transl_table=1
/translation="MPEPTKKEENEVPAPAPPPEEPSKEKEAGTTPAKDWTLVETPPG
EEQAKQNANSQLSILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDL
ASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTHKDKFDSCSFDLEVH
ESTGTTPNIDIRSAFKRSGEGQEDAGELDFSGLLKRREVKQQEEEPQVDVWELLKNAK
PSEYEKIAFQYGITDLRGMLKRLKRMRREEKKSAAFAKILDPAYQVDKGGRVRFVVEL
ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTAGDEKCSTE
LFVREPPIMVTKQLEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIR
VEGKKHILIIEGATKADAAEYSVMTTGGQSSAKLSVDLKPLKILTPLTDQTVNLGKEI
CLKCEISENIPGKWTKNGLPVQESDRLKVVHKGRIHKLVIANALTEDEGDYVFAPDAY
NVTLPAKVHVIDPPKIILDGLDADNTVTVIAGNKLRLEIPISGEPPPKAMWSRGDKAI
MEGSGRIRTESYPDSSTLVIDIAERDDSGVYHINLKNEAGEAHASIKVKVVDFPDPPV
APTVTEVGDDWCIMNWEPPAYDGGSPILGYFIERKKKQSSRWMRLNFDLCKETTFEPK
KMIEGVAYEVRIFAVNAIGISKPSMPSRPFVPLAVTSPPTLLTVDSVTDTTVTMRWRP
PDHIGAAGLDGYVLEYCFEGSTSAKQSDENGEAAYDLPAEDWIVANKDLIDKTKFTIT
GLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKEIIEPPKIRIPRHLKQTYIRRVGEA
VNLVIPFQGKPRPELTWKKDGAEIDKNQINIRNSETDTIIFIRKAERSHSGKYDLQVK
VDKFVETASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKAD
KKSMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDG
KIYKNPVYEDFDFSEAPMFTQPLVNTYAIAGYNATLNCSVRGNPKPKITWMKNKVAIV
DDPRYRMFSNQGVCTLEIRKPSPYDGGTYCCKAVNDLGTVEIECKLEVKVIYQGVNTP
GQPVFLEGQQQVGSPSADSSCKAYLQT"
BASE COUNT 1198 a 818 c 948 g 898 t
ORIGIN
1 ttttgtcaca ccgacctgca ccatctctcg cctgcctgtg gggtttctgt caactagtcg
61 tggagggaag gagactcttt aaagaataac atcttattgt ggccatgcca gaacccacta
121 agaaagagga aaatgaagtg ccagccccag ccccaccccc ggaagaacca agtaaagaga
181 aggaggccgg aactacacca gcaaaagact ggacccttgt cgaaactcct cctggggagg
241 aacaagccaa gcagaatgcc aactcccagc tgtccatctt gttcattgaa aaacctcaag
301 gaggaacagt gaaagttggt gaagatatca ccttcatagc caaagtcaag gctgaagatc
361 ttctgagaaa acccactatc aaatggttca aaggaaaatg gatggacctg gccagcaaag
421 ccgggaagca ccttcagctg aaggaaacct ttgagaggca cagtcgggtg tacacatttg
481 agatgcagat catcaaggcc aaagataact ttgcaggaaa ttacagatgc gaggtcaccc
541 ataaggataa gtttgacagc tgttcatttg atcttgaagt gcacgaatct actgggacta
601 ctccaaacat tgacatcaga tctgctttca agagaagtgg agaaggtcaa gaggatgcag
661 gagaacttga ctttagtggt ctcctgaaac gtagggaggt gaagcagcag gaggaagaac
721 cccaggtgga cgtatgggag ttgctgaaga acgcgaaacc cagtgagtac gagaagatcg
781 ccttccagta tggaatcacc gacctgcgcg gcatgctcaa gcgactcaag cgcatgcgca
841 gagaggagaa gaagagcgca gcttttgcaa aaattcttga tcctgcatat caggttgaca
901 aaggaggcag agtgaggttt gttgtggagc tggcagatcc aaagttggag gtgaaatggt
961 ataaaaatgg tcaagaaatt cgacccagta ccaaatacat ctttgaacac aaaggatgcc
1021 agagaatcct gtttatcaat aactgtcaga tgacagatga ttcagagtat tatgtgacag
1081 ccggtgatga gaaatgttcc actgagctct tcgtaagaga gcctccaatt atggtgacca
1141 aacagctgga agatacaact gcttattgtg gggagagagt ggaattagaa tgtgaggtgt
1201 ctgaagatga tgccaatgta aaatggttta agaatggtga agagattatc cctggtccaa
1261 aatcaagata ccgaattaga gttgagggta aaaaacacat cttgatcata gagggagcaa
1321 caaaggctga tgctgcagaa tattcagtaa tgacaacagg aggacaatca tctgctaaac
1381 ttagtgttga cttgaaacct ctgaagattt tgacacctct gactgatcag actgtaaatc
1441 ttggaaaaga aatctgcctg aagtgtgaaa tctctgaaaa cataccagga aaatggacta
1501 aaaatggcct acctgttcag gagagtgacc gtctaaaggt ggttcacaag ggaaggatcc
1561 acaagttagt gatagccaat gccctcactg aagatgaagg tgattatgta tttgcacctg
1621 atgcctacaa tgttactctg cctgccaaag ttcatgttat tgatcctcct aagatcatcc
1681 tggatggtct tgatgctgac aacacagtga cagtgattgc aggaaacaag cttcgtcttg
1741 agatccccat cagcggagaa ccacctccta aagccatgtg gagccgggga gataaggcta
1801 ttatggaagg cagtggccgg ataagaacag aatcttaccc tgatagcagc actctggtca
1861 ttgatatagc tgaaagagat gactctggtg tttaccacat caatctgaaa aacgaagctg
1921 gagaggcaca tgcaagcatc aaggttaaag ttgtggactt ccctgatcct ccagtggcac
1981 cgactgtgac agaggtggga gatgactggt gtatcatgaa ctgggagcct cctgcctacg
2041 acggaggctc tccaatccta ggatatttta ttgagaggaa gaagaaacaa agctccaggt
2101 ggatgaggct gaattttgat ctctgcaaag aaacaacttt tgagcccaag aagatgattg
2161 aaggtgtggc ctatgaggtc cgcatctttg cagtcaatgc cattggcatc tccaagccca
2221 gtatgccctc caggcctttt gttcctttgg ctgtaacaag ccctcctact cttctgactg
2281 tggactctgt cactgacacg actgtcacga tgaggtggcg ccccccagac cacattggtg
2341 cagcaggttt agatggctat gtgctagagt attgctttga aggaagtaca tcagcaaaac
2401 agtctgatga aaatggggag gctgcctatg atctgccagc tgaggactgg atagttgcaa
2461 acaaagatct gattgacaag acgaagttca ccatcacagg tctgccaaca gatgcaaaga
2521 tctttgtgcg tgtgaaggct gttaatgcag ctggtgccag cgagcccaag tactattctc
2581 agcccattct cgtgaaggaa atcatagaac ctccaaagat tcgcatccca agacacctga
2641 agcaaaccta tatccgcaga gttggagaag ctgtcaatct ggttatacct ttccagggaa
2701 aaccaagacc agaattaact tggaagaagg atggtgcaga aattgataag aatcaaataa
2761 acattcgcaa ctctgagact gatacaatca tatttattag aaaagcagag aggagccact
2821 ctgggaaata tgatctgcaa gtcaaagtgg acaaattcgt ggagaccgca tcaattgaca
2881 tccagatcat tgaccgtcct ggtccacccc aaattgtgaa gattgaggat gtctggggag
2941 aaaatgtcgc tctcacatgg actccaccaa aggatgatgg aaatgctgct atcacaggct
3001 ataccattca gaaggctgac aagaagagca tggaatggtt tactgtcatt gagcattatc
3061 atcgaaccag tgccaccatt actgaattgg tcatagggaa tgaatattac ttccgggtct
3121 tttctgaaaa catgtgtggc ctcagtgagg atgccaccat gactaaagag agtgcagtga
3181 tcgccaggga tggtaaaatc tacaaaaatc cagtgtatga agactttgat ttctcagagg
3241 cacccatgtt tactcagcct ttggttaaca cctatgccat agctggttac aatgccaccc
3301 taaactgcag tgtgagagga aatcctaagc ctaaaataac ctggatgaaa aacaaagttg
3361 ctattgtgga tgatccaaga tacaggatgt tcagcaacca gggagtctgt accctggaaa
3421 ttcgcaagcc cagcccctat gatggaggca cttactgctg caaagcagtc aatgaccttg
3481 ggacagtgga gattgaatgc aaactggagg tgaaagtgat atatcaagga gtaaataccc
3541 ctggacaacc agtcttcctg gaggggcagc aacaggtggg ctctccttct gcagactcct
3601 cttgcaaggc gtacctccaa acataattga ttcgtatctg cgagacttac actcaagcaa
3661 tcctgaggaa tactgaggga gggcctggct actgtctctc tgcactctgc tgctttgaaa
3721 tctggttgaa atgagaaaaa gcattttctg ttttcccacc aggcccccaa gtgtggtctt
3781 tttctttcct cctaatgttg aagagaaaaa aaaaaaaaaa gtttgcccag attgcttaat
3841 taaaaattgc aaacaaaatc tc
//