LOCUS AK296675 991 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57518 complete cds, highly similar to
Syntaxin-5.
ACCESSION AK296675
VERSION AK296675.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 991)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..991
/clone="CORDB2000574"
/clone_lib="CORDB2"
/db_xref="H-InvDB:HIT000491299"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cord blood"
CDS 162..941
/codon_start=1
/note="highly similar to Syntaxin-5"
/protein_id="BAG59272.1"
/transl_table=1
/translation="MAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIK
QDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRT
ENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQL
QLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLD
VEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA"
BASE COUNT 241 a 261 c 273 g 216 t
ORIGIN
1 agtctttggt cgggtttcgg cggcttcagt gctcggggag gaggcagtga cggccggtga
61 gattggaagt ggcggcggcg gcaggcggca gaggggagaa tggaatccag acaaataagc
121 cagctttgcg tgctgtccga caacgcagtg aattcaccct catggccaag cgcattggga
181 aagaccttag caacacattt gccaagctgg agaagctgac aatcttggca aagcgcaagt
241 ccctctttga tgataaagca gtggaaattg aagagctaac atatatcatc aaacaggaca
301 tcaatagcct caacaaacaa attgctcagc tccaggattt cgtgagagcc aagggcagcc
361 agagtggccg gcacctgcag acccactcca acaccattgt ggtctccttg cagtcgaaac
421 tggcttctat gtccaatgac ttcaaatcgg ttttagaagt gaggacagag aacctgaagc
481 agcagaggag ccggagagag cagttctccc gggcacctgt gtcagccctg ccccttgccc
541 ctaaccacct gggcggtggt gctgtggttc tgggggcaga gtcccatgcc tccaaggatg
601 tcgccatcga catgatggac tctcggacca gccagcagct gcagctcatt gacgagcagg
661 attcctacat ccagagtcgg gcagacacca tgcagaacat tgagtcgaca attgttgagt
721 tgggctccat ctttcagcag ttggcacaca tggttaagga acaggaggaa accattcaga
781 ggatcgacga gaacgtgcta ggagcccagc tggacgttga ggccgcccat tcagagatcc
841 tcaagtactt ccagtctgtc acctccaacc ggtggctcat ggtcaaaatc ttcctcatcc
901 tcattgtctt cttcatcatc tttgtggtct tccttgcttg aaccctctct actctgaggc
961 actctgttgg ggtttgggac cctcctggga a
//