LOCUS AK296647 1431 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50792 complete cds, highly similar to Bile
acid receptor.
ACCESSION AK296647
VERSION AK296647.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1431)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1431
/clone="COLON2007460"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000491271"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 43..1425
/codon_start=1
/note="highly similar to Bile acid receptor"
/protein_id="BAH12409.1"
/transl_table=1
/translation="MEMMSMKPAKGVLTEQVAGPLGQNLEVEPYSQYSNVQFPQVQPQ
ISSSSYYSNLGFYPQQPEEWYSPGIYELRRMPAETLYQGETEVAEMPVTKKPRMGASA
GRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMYMR
RKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLR
QVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEEFSAEENFLILT
EMATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPSGHSD
LLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAV
EKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFT
PLLCEIWDVQ"
BASE COUNT 451 a 279 c 344 g 357 t
ORIGIN
1 aaaattagtc ctcactgcag ctgtacgccg tcaggatttt tcatggaaat gatgagtatg
61 aagcccgcga aaggtgtttt aacagaacaa gtggcaggtc ctctgggaca gaacctggaa
121 gtggaaccat actcgcaata cagcaatgtt cagtttcccc aagttcaacc acagatttcc
181 tcgtcatcct attattccaa cctgggtttc tacccccagc agcctgaaga gtggtactct
241 cctggaatat atgaactcag gcgtatgcca gctgagactc tctaccaggg agaaactgag
301 gtagcagaga tgcctgtaac aaagaagccc cgcatgggcg cgtcagcagg gaggatcaaa
361 ggggatgagc tgtgtgttgt ttgtggagac agagcctctg gataccacta taatgcactg
421 acctgtgagg ggtgtaaagg tttcttcagg agaagcatta ccaaaaacgc tgtgtacaag
481 tgtaaaaacg ggggcaactg tgtgatggat atgtacatgc gaagaaagtg tcaagagtgt
541 cgactaagga aatgcaaaga gatgggaatg ttggctgaat gtatgtatac aggcttgtta
601 actgaaattc agtgtaagtc taagcgactg agaaaaaatg tgaagcagca tgcagatcag
661 accgtgaatg aagacagtga aggtcgtgac ttgcgacaag tgacctcgac aacaaagtca
721 tgcagggaga aaactgaact caccccagat caacagactc ttctacattt tattatggat
781 tcatataaca aacagaggat gcctcaggaa ataacaaata aaattttaaa agaagaattc
841 agtgcagaag aaaattttct cattttgacg gaaatggcaa ccaatcatgt acaggttctt
901 gtagaattca caaaaaagct accaggattt cagactttgg accatgaaga ccagattgct
961 ttgctgaaag ggtctgcggt tgaagctatg ttccttcgtt cagctgagat tttcaataag
1021 aaacttccgt ctgggcattc tgacctattg gaagaaagaa ttcgaaatag tggtatctct
1081 gatgaatata taacacctat gtttagtttt tataaaagta ttggggaact gaaaatgact
1141 caagaggagt atgctctgct tacagcaatt gttatcctgt ctccagatag acaatacata
1201 aaggatagag aggcagtaga gaagcttcag gagccacttc ttgatgtgct acaaaagttg
1261 tgtaagattc accagcctga aaatcctcaa cactttgcct gtctcctggg tcgcctgact
1321 gaattacgga cattcaatca tcaccacgct gagatgctga tgtcatggag agtaaacgac
1381 cacaagttta ccccacttct ctgtgaaatc tgggacgtgc agtgatgggg a
//