LOCUS AK296616 1331 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55145 complete cds, highly similar to Homo
sapiens tubulin, alpha-like 3 (TUBAL3), mRNA.
ACCESSION AK296616
VERSION AK296616.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1331)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1331
/clone="COLON2003992"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000491240"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 37..1257
/codon_start=1
/note="highly similar to Homo sapiens tubulin, alpha-like
3 (TUBAL3), mRNA"
/protein_id="BAG59224.1"
/transl_table=1
/translation="MDQLENAKMEHTNASFDTFFCETRAGKHVPRALFVDLEPTVIDG
IRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLEGTRKLAEQCGGLQGF
LIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVEPYNSVLTTHS
TTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQVVSSITASLRFEGPLNVD
LIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRL
GKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGD
LAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLEAREDL
AALERDYEEVAQSF"
BASE COUNT 317 a 340 c 362 g 312 t
ORIGIN
1 attactacag ggcaggaagg gcacgttctc atcagcatgg atcagctgga aaatgcaaaa
61 atggagcaca caaatgcatc tttcgatacc ttcttctgtg agacaagagc tgggaagcat
121 gtgcctagag cactcttcgt ggacttggag ccaactgtta tagatgggat ccggacgggc
181 cagcaccgtt cactcttcca ccccgagcag ctccttagcg gaaaggagga tgctgccaac
241 aattacgcgc gaggccgtta ctctgtgggg tcggaggtca tcgaccttgt gctggagggg
301 acccggaagc tggcagaaca gtgtggtgga cttcagggat ttttgatttt ccgaagcttt
361 ggaggaggca ctggttcagg gtttacgtct ctcttaatgg agaggctcac aggagaatat
421 agcagaaaga ctaagctgga gttctcggtc tacccagccc ccaggatctc cactgccgtg
481 gtagagcctt ataactctgt cctcaccacc cactccacca cagagcacac ggactgtacc
541 ttcatggtgg acaacgaggc cgtctatgat atatgccatc gtaaactcgg tgttgaatgc
601 ccctctcatg ccagcatcaa tagattggtg gttcaggtgg tatcttccat cactgcctcc
661 ctccggtttg aagggccctt gaatgtagac ctaattgaat tccagaccaa cctggtacct
721 tatccgagaa tacatttccc catgacagcc ttcgccccca tcgtctctgc tgacaaagcc
781 taccatgagc agttctctgt gtcagacatc accactgctt gctttgagtc ctccaaccag
841 ctggtcaagt gtgatcctcg gcttgggaag tacatggcct gctgcctact ctatagaggg
901 gatgtggtcc ccaaggaagt gaatgcagca atcgcagcca cgaagtcgag gcactctgtt
961 cagtttgtag attggtgtcc aactggtttc aaggtgggca tcaacaatcg gccgcccacg
1021 gtgatgccgg gtggggacct ggccaaagtc caccggtcca tctgcatgct gagcaacacc
1081 acggcgattg tggaggcctg ggcccgcctg gaccacaagt ttgacctcat gtacgccaag
1141 agagcatttc tgcactggta cctcagagaa ggcatggaag aagcagagtt cttggaggcc
1201 agggaagatc tggcagccct ggagagggac tatgaggaag tggcgcaaag tttctgaggc
1261 atgtatgatg ggtgcaaatg aatgtcaagt taaaatggca tgttttcttt tcaagccgtt
1321 atatgcctag t
//