LOCUS AK296611 1929 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57314 complete cds, highly similar to
Serine/threonine-protein kinase VRK2 (EC 2.7.11.1).
ACCESSION AK296611
VERSION AK296611.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1929)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1929
/clone="COLON2003375"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000491235"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 662..1834
/codon_start=1
/note="highly similar to Serine/threonine-protein kinase
VRK2 (EC 2.7.11.1)"
/protein_id="BAG59222.1"
/transl_table=1
/translation="MVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEY
VHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLD
AHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKW
APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHT
PNSQKVDSQKAATKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQ
ESTRRRQKYQESQEPLNEVNSFPQKISYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYK
YTSTVSTGITDLESSTGLWPTISQFTLSEETNADVYYYRIIIPVLLMLVFLALFFL"
BASE COUNT 618 a 385 c 431 g 495 t
ORIGIN
1 aaaggaaccg gctgcggcct gtgtgaggct ccgcgggccg ctgcactgcg aggccgacgc
61 agctggagag aagttaggca ggtcctaggg agggcaggct cgagtgctgg gcccgcctcc
121 ccgcgggact gtaggcccgg gggctccgcc tcgtcgcagc ggcagaagtg atgccaccaa
181 aaagaaatga aaaatacaaa cttcctattc catttccaga aggcaaggtt ctggatgata
241 tggaaggcaa tcagtgggta ctgggcaaga agattggctc tggaggattt ggattgatat
301 atttagagac actggccatt tttctctctc caatgcttag tgtggagtaa aggcagcttc
361 ccgcaaattt atttcaagca agagcaatcg gaagcttcga catgtgtgaa agaggcgcat
421 agagaacata gcttccattt cagctttccc cacaaataaa ccagagaaag atgcaagaca
481 tgtagtaaaa gtggaatatc aagaaaatgg cccgttattt tcagaactta aattttatca
541 gagagttgca aaaaaagact gtatcaaaaa gtggatagaa cgcaaacaac ttgattattt
601 aggaattcct ctgttttatg gatctggtct gactgaattc aagggaagaa gttacagatt
661 tatggtaatg gaaagactag gaatagattt acagaagatc tcaggccaga atggtacctt
721 taaaaagtca actgtcctgc aattaggtat ccgaatgttg gatgtactgg aatatataca
781 tgaaaatgaa tatgttcatg gtgatataaa agcagcaaat ctacttttgg gttacaaaaa
841 tccagaccag gtttatcttg cagattatgg actttcctac agatattgtc ccaatgggaa
901 ccacaaacag tatcaggaaa atcctagaaa aggccataat gggacaatag agtttaccag
961 cttggatgcc cacaagggag tagccttgtc cagacgaagt gacgttgaga tcctcggcta
1021 ctgcatgctg cggtggttgt gtgggaaact tccctgggaa cagaacctga aggaccctgt
1081 ggctgtgcag actgctaaaa caaatctgtt ggacgagctc ccccagtcag tgcttaaatg
1141 ggctccttct ggaagcagtt gctgtgaaat agcccaattt ttggtatgtg ctcatagttt
1201 agcatatgat gaaaagccaa actatcaagc cctcaagaaa attttgaacc ctcatggaat
1261 acctttagga ccactggact tttccacaaa aggacagagt ataaatgtcc atactccaaa
1321 cagtcaaaaa gttgattcac aaaaggctgc aacaaagcaa gtcaacaagg cacacaatag
1381 gttaatcgaa aaaaaagtcc acagtgagag aagcgctgag tcctgtgcaa catggaaagt
1441 gcagaaagag gagaaactga ttggattgat gaacaatgaa gcagctcagg aaagcacaag
1501 gagaagacag aaatatcaag agtctcaaga acctttgaat gaagtaaaca gtttcccaca
1561 aaaaatcagc tatacacaat tcccaaactc attttatgag cctcatcaag attttaccag
1621 tccagatata ttcaagaagt caagatctcc atcttggtat aaatacactt ccacagtcag
1681 cacggggatc acagacttag aaagttcaac tggactttgg cctacaattt cccagtttac
1741 tcttagtgaa gagacaaacg cagatgttta ttattatcgc atcatcatac ctgtcctttt
1801 gatgttagta tttcttgctt tattttttct ctgaagatga taccaaaatt ccttttgata
1861 attttttaag tttccagctc ttcaccgaaa tgttgtattc ttatttcagt gtttccttcc
1921 agacatttt
//