LOCUS AK296610 2391 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54016 complete cds, highly similar to
DCC-interacting protein 13 beta.
ACCESSION AK296610
VERSION AK296610.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2391)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2391
/clone="COLON2003336"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000491234"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 147..2012
/codon_start=1
/note="highly similar to DCC-interacting protein 13 beta"
/protein_id="BAH12397.1"
/transl_table=1
/translation="MQRVYGAQNEMCLATQQLSKQLLAYEKQNFALGKGDEEVISTLH
YFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLASNEHDLSMA
KYSRLPKKKENEKVKTEVGKEVAAARRKQHLSSLQYYCALNALQYRKQMAMMEPMIGF
AHGQINFFKKGAEMFSKRMDSFLSSVADMVQSIQVELEAEAEKMRVSQQELLSVDESV
YTPDSDVAAPQINRNLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVAG
GLIQDLDNCSVMAVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQI
YLTDNPEAVAIKLNQTALQAVTPITSFGKKQESSCPSQNLKNSEMENENDKIVPKATA
SLPEAEELIAPGTPIQFDIVLPATEFLDQNRGSRRTNPFGETEDESFPEAEDSLLQQM
FIVRFLGSMAVKTDSTTEVIYEAMRQVLAARAIHNIFRMTESHLMVTSQSLRLIDPQT
QVSRANFELTSVTQFAAHQENKRPVGFVIRVPESTGEESLSTYIFESNSEGEKICYAI
NLGKEIIEVQKDPEALAQLMLSIPLTNDGKYVLLNDQPDDDDGNPNEHRGAESEA"
BASE COUNT 727 a 526 c 552 g 586 t
ORIGIN
1 gcgataggaa cacaaatgca gctttgagct cctgcagctt gtacttcttc aggggcttat
61 tctcttgtcc tactcgctct ttactgagcg tgtttgaaga agatgctggc accctcacag
121 actataccaa ccagctgctc caggcaatgc agcgcgtcta tggagcccag aatgagatgt
181 gcctggccac acaacagctt tctaagcaac tgctggcata tgaaaaacag aactttgctc
241 ttggcaaagg tgatgaagaa gtaatttcaa cactccacta tttttccaaa gtggtggatg
301 agcttaatct tctccataca gagctggcta aacagttggc agacacaatg gttctaccta
361 tcatacaatt ccgagaaaag gatctcacag aagtaagcac tttaaaggat ctatttggac
421 tcgctagcaa tgagcatgac ctctcaatgg caaaatacag caggctgcct aagaaaaagg
481 agaatgagaa ggtgaagacc gaagtcggaa aagaggtggc cgcggcccgg cggaagcagc
541 acctctcctc ccttcagtac tactgtgccc tcaacgcgct gcagtacaga aagcaaatgg
601 ccatgatgga gcccatgata ggctttgccc atggacagat taactttttt aagaagggag
661 cagagatgtt ttccaaacgt atggacagct ttttatcctc cgttgcagac atggttcaaa
721 gcattcaggt agaactggaa gccgaggcgg aaaagatgcg ggtgtcccag caagaattac
781 tttctgttga tgaatctgtt tacactccag actctgatgt ggccgcacca cagatcaaca
841 ggaacctcat ccagaaggct ggttacctta atcttagaaa caaaacaggg ctggtcacca
901 ccacctggga gaggctttat ttcttcaccc aaggcgggaa tctcatgtgt cagcccaggg
961 gagccgtggc tggaggtttg atccaggacc tggacaactg ctcagtgatg gccgtggatt
1021 gcgaagaccg gcgctactgc ttccagatca ccacgcccaa tggaaaatcg ggaataatcc
1081 tccaggctga gagcagaaag gaaaatgaag agtggatatg tgcaataaac aacatctcca
1141 gacagatcta cctgaccgac aaccctgagg cagtcgcgat caagttgaat cagaccgctc
1201 tgcaagcagt gactcccatt acaagttttg gaaaaaaaca agaaagctca tgccccagcc
1261 agaacctgaa aaattcagag atggaaaatg aaaatgacaa gattgttccc aaagcaacag
1321 ccagtctacc tgaagcagag gagctgatcg cgcctggaac gccgattcaa ttcgatattg
1381 tgcttcctgc tacagaattc cttgatcaga acagagggag caggcgtacc aacccttttg
1441 gtgaaactga ggatgaatca tttccagaag cagaagattc tcttttgcag cagatgttta
1501 tagttcggtt tttgggatca atggcagtta aaacagacag cactactgaa gtgatttatg
1561 aagcgatgag acaagtattg gctgctcggg ctattcataa catcttccgc atgacagaat
1621 cccatctgat ggtcaccagt caatctttga ggttgataga tccacagact caagtatcaa
1681 gggccaattt tgaacttacc agtgtcacac aatttgctgc tcatcaagaa aacaagagac
1741 cggttggttt tgtcatccgt gttcctgaat ccactggaga agaatctctg agtacataca
1801 tttttgaaag caactcagaa ggcgaaaaga tatgttatgc tattaatttg ggaaaagaaa
1861 ttattgaggt tcagaaggat ccagaagcac tggctcaatt aatgctgtcc ataccactaa
1921 ccaatgatgg aaaatatgta ctgttaaacg atcaaccaga tgacgatgat ggaaatccaa
1981 atgaacatag aggcgcagaa tccgaagcat aactcacttg cgcctgtggg ggaagagcaa
2041 acaggaagga gagctacctc ctaagggttt taacgtctct gacatacagg cacactgacc
2101 tgatttccga aggctgacaa tcgtttgtgg aatgtaatct tgatgccttg atactgagac
2161 ttgggaggga aactaagaaa tggttgacag cgttcccacc catctacaat gttattttag
2221 gtgctttgtg gtaagtcttt tttcttagat tgcgctaaaa tttcttagat tgttcagcgc
2281 tcagaacaaa agtttgaaaa atgcattgtt catatgaatg tcatctcttt tcagtttcca
2341 gtatcctttt taaaaaatgg caaaagccta gatttacaat ttgatgaaca c
//