LOCUS AK296605 1110 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ52512 complete cds, highly similar to Exosome complex exonuclease RRP4 (EC 3.1.13.-). ACCESSION AK296605 VERSION AK296605.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1110) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1110 /clone="COLON2002063" /clone_lib="COLON2" /db_xref="H-InvDB:HIT000491229" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="colon" CDS 22..825 /codon_start=1 /note="highly similar to Exosome complex exonuclease RRP4 (EC 3.1.13.-)" /protein_id="BAG59218.1" /transl_table=1 /translation="MAMEMRLPVARKPLSERLGRDTKKHLVVPGDTITTDTGFMRGHG TYMGEEKLIASVAGSVERVNKLICVKALKTRYIGEVGDIVVGRITEVQQKRWKVETNS RLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISGVLVQVSPSLVKRQKTHF HDLPCGASVILGNNGFIWIYPTPEHKEEEAGGFIANLEPVSLADREVISRLRNCIISL VTQRMMLYDTSILYCYEASLPHQIKDILKPEIMEEIVMETRQRLLEQEG" BASE COUNT 282 a 253 c 320 g 255 t ORIGIN 1 gcgcaactca ttggcgccaa gatggcgatg gagatgaggc ttccagtggc tcgcaagcct 61 cttagcgaga gactgggccg cgacactaag aaacatctag tggtgccggg ggatacaatc 121 actacggaca caggattcat gcggggccat ggaacgtata tgggagaaga gaagctcatt 181 gcatctgttg ctggctctgt ggagagagta aacaagttga tctgtgtgaa agctttgaaa 241 accagataca ttggtgaagt aggagacatc gtagtgggac gaatcacaga ggttcaacag 301 aagaggtgga aggtggagac caactccagg ctggattcgg tcttgctgct ctcgtccatg 361 aaccttcctg gaggagagct gaggagaaga tctgcagaag atgagcttgc aatgagaggt 421 ttcttacagg aaggggacct tatcagtggg gttttggtcc aggtttcccc ctccctggtg 481 aaacggcaga agacccactt tcatgatttg ccatgtggtg cctcagtgat tctcggtaac 541 aacggcttca tctggattta cccaacacct gagcacaaag aagaggaagc agggggcttc 601 attgcaaacc tggagcctgt ctctcttgct gatcgagagg tgatatcccg gcttcggaac 661 tgcatcatct cgctggtaac tcagaggatg atgctgtatg ataccagcat cctgtactgc 721 tatgaagcat cccttccaca tcagatcaaa gacatcttaa agccagaaat aatggaggag 781 attgtgatgg aaacacgcca gaggcttttg gaacaggagg gataaggagg tgctccagaa 841 gcacgggact gtggaccttg caggagtgaa gactgtgatg tgtggtcccc atatgtggct 901 cagcaaagac tcgagagatc atccctttgt ctgcattgac ggccctgtga cggcctccag 961 cccacaggcc tgctttctcc tgtcctaaca ccaagcctgg gtggcagatg aacagtgctt 1021 ccttgggttg ccagctgagt cccggtatta gggaatagtt tcagctcttt caaagtgcac 1081 agtgttacag tcgaatgggc tcccatcctg //