LOCUS AK296604 969 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56716 complete cds, highly similar to
Galectin-4.
ACCESSION AK296604
VERSION AK296604.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 969)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..969
/clone="COLON2001977"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000491228"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 60..575
/codon_start=1
/note="highly similar to Galectin-4"
/protein_id="BAG59217.1"
/transl_table=1
/translation="MAYVPAPGYQPTYNPTLPYYQPIPGGLNVGMSVYIQGVASEHVK
RFFVNFVVGQDPGSDVAFHFNPRFDGWDKVVFNTLQGGKWGSEERKRSMPFKKGAAFE
LVFIVLAEHYKVVVNGNPFYEYGHRLPLQMVTHLQVDGDLQLQSINFIGGQPLRPQGP
PMMPPYPVSTC"
BASE COUNT 208 a 286 c 275 g 200 t
ORIGIN
1 accatctccc actcctgcag ctcttctcac aggaccagcc actagcgcag cctcgagcga
61 tggcctatgt ccccgcaccg ggctaccagc ccacctacaa cccgacgctg ccttactacc
121 agcccatccc gggcgggctc aacgtgggaa tgtctgttta catccaagga gtggccagcg
181 agcacgtgaa gcggttcttc gtgaactttg tggttgggca ggatccgggc tcagacgtcg
241 ccttccactt caatccgcgg tttgacggct gggacaaggt ggtcttcaac acgttgcagg
301 gcgggaagtg gggcagcgag gagaggaaga ggagcatgcc cttcaaaaag ggtgccgcct
361 ttgagctggt cttcatagtc ctggctgagc actacaaggt ggtggtaaat ggaaatccct
421 tctatgagta cgggcaccgg cttcccctac agatggtcac ccacctgcaa gtggatgggg
481 atctgcaact tcaatcaatc aacttcatcg gaggccagcc cctccggccc cagggacccc
541 cgatgatgcc accttaccct gtaagtactt gctgataggt gagggtcttc ctccctagtg
601 gggtccctca gcccctctca cccttcctgc cttctgtcca tcgttcaggg tcccggacat
661 tgccatcaac agctgaacag cctgcccgtg agtgggaggg ctgggagggc cccgggtgag
721 gagtgggaat ggtgagaatt ggggtagggg gagctaagag gggttgcagc ccaaggtgta
781 ctaacccagc acctagagaa acgccggagt ctaatgggtg tgtcatagat atctgtcgac
841 tcttggagaa taatatcgct tcttcctcac ttcacagacc atggaaggac ccccaacctt
901 caacccgcct gtgccatatt tcgggaggct gcaaggaggg ctcacagctc gaagaaccat
961 catcatcaa
//