LOCUS AK296601 1417 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60640 complete cds, highly similar to Sorcin.
ACCESSION AK296601
VERSION AK296601.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1417)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1417
/clone="COLON2001767"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000491225"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 63..605
/codon_start=1
/note="highly similar to Sorcin"
/protein_id="BAG59214.1"
/transl_table=1
/translation="MQYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLT
QSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRS
GTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRR
RDTAQQGVVNFPYDDVSLRN"
BASE COUNT 397 a 283 c 325 g 412 t
ORIGIN
1 actctgcaag aaggcaatcc tctaaggatc accagcttct acctataaga cttcaactca
61 agatgcagta tggaggggct cccggagggc ctgcgtttcc cggacaaact caggatccgc
121 tgtatggtta ctttgctgct gtagctggac aggatgggca gatagatgct gatgaattgc
181 agagatgtct gacacagtct ggcattgctg gaggatacaa accttttaac ctggagactt
241 gccggcttat ggtttcaatg ctggatagag atatgtctgg cacaatgggt ttcaatgaat
301 ttaaagaact ctgggctgta ctgaatggct ggagacaaca ctttatcagt tttgacactg
361 acaggagtgg aacagtagac ccacaagaat tgcagaaggc cctgacaaca atgggattta
421 ggttgagtcc ccaggctgtg aattcaattg caaaacgata cagcaccaat ggaaagatca
481 ccttcgacga ctacatcgcc tgctgcgtca aactgagggc tcttacagac agctttcgaa
541 gacgggatac tgctcagcaa ggtgttgtga atttcccata tgatgatgta agtcttagaa
601 attaagagat acagtagatg aaaaggatgt acaccagatg ggtatccctt tgaaattagc
661 tgttaagaat atcttaaggt taaggatgcc agagacataa gggattcaaa agttagaaag
721 agttatcatc cagaatttat taatttcatt tattagtctt aactatagtg agaccatgat
781 ttgatttgca ttcagagacc tgggttcaag acccagcttg ttgtatttat tagctgggtc
841 acttaagcag gtttcttaat tgctgtgaca ctatatgaat aaagaagata tggtagtaat
901 gcctttttca ctgagccatt gtaagatttc tattagaaat gcccttgaaa aacactatgc
961 agatatacta tctgcttttg tcttctgtaa acaaatcatg tcagtcactg agaatagata
1021 acagctcaat agttttgcat acctatgttc ttcattgagg gcataaggca ggcaacaact
1081 taaatcacaa tttttttttt tttttgagat ggagtctcgc tctgttgccc aggttggagt
1141 gcagtggcgc aatgtcagct cactgcaacc tccacgtctc gggttctagc gattctcctg
1201 cctcagcctc ctgagggact ataggcatgt gccaccatac ctggttaagt ttttttgtat
1261 ttttagtaga gacggggttt cactgtgtta gccaggatgg tctcgatctc ctgtccttgt
1321 gatctgtccg cttaggcctc ccaaagtgct gggattacag gcgtgagcca ctgctcccgg
1381 ctaaatcaca atttaaaaca agttatttac taaacag
//