LOCUS AK296590 1551 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60637 complete cds, highly similar to
Trinucleotide repeat-containing 6B protein.
ACCESSION AK296590
VERSION AK296590.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1551)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1551
/cell_type="chondrocytes"
/clone="CHONS2001600"
/clone_lib="CHONS2"
/db_xref="H-InvDB:HIT000491214"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 205..1137
/codon_start=1
/note="highly similar to Trinucleotide repeat-containing
6B protein"
/protein_id="BAG59207.1"
/transl_table=1
/translation="MREKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTK
PSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHK
VLLKRGQPPPPSCMLLGGGAGPPPCTAPGANPNNAQVTGALLQSESGTAPDSTLGGAA
ASNYANSTWGSGASSNNGTSPNPIHIWDKVIVDGSDMEEWPCIASKDTESSSENTTDN
NSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPKAKSVQSSKPKGQ
YLDMVLASALAAWTMAWLVGRRLEPSLALNSGPP"
BASE COUNT 452 a 402 c 395 g 302 t
ORIGIN
1 gagagggaga gagagagcaa gagggagagt gtgtgagaga gagttagttc aagccaaaat
61 ggccgacaga gtctctgctg gtttctgaat atttaaaata caaaaaaaca gatagacaaa
121 aagaattcat tttttggacc ttttttcatt tccatttcta ccttgtatgc ctcaatttgc
181 tggatttaag cactgctgca ctttatgaga gagaaggagc aagaaaggga agaacagtta
241 atggaagaca agaaaaggaa gaaagaggat aaaaagaaaa aagaagccac tcagaaggtc
301 acggaacaaa aaaccaaagt gcccgaagtg acgaaaccaa gtttaagcca accaacggcc
361 gccagcccaa ttggcagctc tccatcgcca ccagtcaatg gtggcaacaa tgccaaaagg
421 gtggcagtgc cgaacggaca accgccaagc gccgcccgct acatgcctcg ggaggtgccg
481 ccgcgattcc gttgccagca ggaccacaaa gtgttactaa aacgtgggca gccccctcca
541 ccgtcctgca tgctccttgg gggtggggca gggcctcctc cctgcacagc acctggagca
601 aacccaaaca acgcacaagt gacaggagcg ctgctgcaga gtgagagtgg gactgcgcca
661 gactcaaccc ttggaggtgc tgctgcttca aattatgcaa attccacttg gggctcggga
721 gcctcctcca acaacggcac ctcccccaac ccaattcaca tctgggacaa ggtgattgta
781 gacgggtctg acatggaaga gtggccttgt attgccagca aagacactga atcttcttcc
841 gaaaacacca ccgataacaa cagtgcctcg aaccctggct ctgagaagag cactctgcca
901 ggaagcacca ctagtaacaa aggaaaaggg agccagtgcc agtctgcaag ttctgggaac
961 gaatgtaatc ttggggtctg gaaatctgac cctaaggcta aatctgttca atcttccaaa
1021 ccaaagggcc aatacctgga tatggttctg gcttcagctc tggcggcatg gactatggca
1081 tggttggtgg gaaggaggct ggaaccgagt ctcgctttaa acagtggacc tccatgatgg
1141 aggggctgcc ctctgtagcc acacaggaag ccaatatgca caaaaatggc gctatagtgg
1201 cccctggtaa aacccgggga gggtcaccgt acaaccagtt tgatatcatc cctggtgaca
1261 cactgggtgg ccatacgggt cctgctggtg atagctggtt acctgccaaa tctccaccaa
1321 caaataaaat cggaagtaaa tccagcaatg ccagttggcc tccagaattc caaccaggag
1381 tgccatggaa aggtatccaa aacattgacc ctgaatctga cccctatgtc accccaggaa
1441 gtgtgctggg gggtacagcc acatctccca ttgtagatac tgaccaccaa ctgctgcggg
1501 ataacaccac agggtctaat tcttccctca acacctcgct gccttcacct g
//