LOCUS AK296588 1364 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55096 complete cds, highly similar to Zinc
finger FYVE domain-containing protein 27.
ACCESSION AK296588
VERSION AK296588.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1364)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1364
/cell_type="chondrocytes"
/clone="CHONS2000613"
/clone_lib="CHONS2"
/db_xref="H-InvDB:HIT000491212"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 148..1266
/codon_start=1
/note="highly similar to Zinc finger FYVE
domain-containing protein 27"
/protein_id="BAH12390.1"
/transl_table=1
/translation="MQTSEREGSGPELSPSVMPEAPLESPPFPTKSPAFDLFNLVLSY
KRLEIYLEPLKDAGAWYSVGALMISVPALLGYLQEVCRARLPDSELMRRKYHSVRQED
LQRVRLSRPEAVAEVKSFLIQLEAFLSRLCCTCEAAYRVLHWENPVVSSQFYGALLGT
VCMLYLLPLCWVLTLLNSTLFLGNVEFFRVVSEYRASLQQRMNPKQEEHAFESPPPPD
VGGKDGLMDSTPALTPTEDLTPGSVEEAEEAEPDEEFKDAIEEDDEGAPCPAEDELAL
QDNGFLSKNEVLRSKVSRLTERLRKRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSF
CSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSK"
BASE COUNT 269 a 400 c 423 g 272 t
ORIGIN
1 gattttcgga cctgcgactt ccgaacaacc ctggcaggag gagcggcgtt cagccggggg
61 aggcctgaag aaacgctccg gggcccagtg gctctacccc tgctcctgcc cgaccctgcc
121 gcctccctca cggagccagc ggccggaatg cagacatcag aacgtgaggg gagtgggccg
181 gagctgagcc ccagcgtgat gcccgaggct cccctggagt ctccaccttt tcctaccaag
241 tccccagcgt ttgacctttt caacttggtt ctctcctaca agaggctgga gatctacctg
301 gaacccttga aggatgcagg tgcatggtac tcagtaggtg ccctgatgat ttcagtgccc
361 gccctgctgg gctaccttca ggaggtttgc cgggcacggc tgcctgattc cgagctgatg
421 cggaggaagt atcatagcgt gaggcaggag gacctgcaga gagttcgcct gtctcgtccc
481 gaggccgtgg ctgaggttaa gagcttcttg atccagctgg aggccttcct gagccgcctg
541 tgctgcacat gtgaagccgc ctaccgcgtg ctgcactggg agaaccccgt cgtgtcctca
601 cagttctatg gggctcttct gggcacagtc tgcatgctgt atttgctgcc actctgctgg
661 gttctcaccc ttttaaacag cacgctcttt ctggggaatg tggagttctt ccgagttgtg
721 tctgagtaca gggcatctct gcagcagagg atgaacccaa agcaggaaga gcatgccttt
781 gagagtcctc caccaccaga tgttgggggg aaggatggtc tgatggacag cacgcctgcc
841 ctcacaccca cggaggacct cacaccgggc agcgtggagg aggctgagga ggctgagcca
901 gatgaagagt ttaaagatgc gattgaggag gatgatgaag gcgccccgtg cccagcagag
961 gatgagctgg ccctgcagga caacgggttc ctgagcaaga atgaggtgct gcgcagcaag
1021 gtgtctcggc tcacggagcg gctccgcaag cgctacccca ccaacaactt cgggaactgc
1081 acgggctgct cggccacctt ctcagtgctg aagaagaggc ggagctgcag taattgtgga
1141 aacagcttct gctctcgatg ctgctccttc aaggtgccca agtcctccat gggggccaca
1201 gcccctgaag cccagaggga gactgtgttt gtgtgtgcct cgtgtaacca gaccttgagc
1261 aagtgagaag agaggccagg gtccaaccag gcacccgtcc ttggggccag cagtagaccc
1321 cccactctcc ccacccctgg cccactgtgg tgtgtgctgg gcaa
//