LOCUS AK296582 1773 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58539 complete cds, highly similar to
Keratin, type II cytoskeletal 4.
ACCESSION AK296582
VERSION AK296582.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1773)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1773
/clone="CERVX2002035"
/clone_lib="CERVX2"
/db_xref="H-InvDB:HIT000491206"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cervix"
CDS 59..1588
/codon_start=1
/note="highly similar to Keratin, type II cytoskeletal 4"
/protein_id="BAG59202.1"
/transl_table=1
/translation="MIARQQCVRGGPRGFSCGSAIVGGGKRGAFSSVSMSGGAGRCSS
GGFGSRSLYNLRGNKSISMSVAGSRQGACFGGGFGGSFSGKGGPGFPVCPAGGIQEVT
INQSLLTPLHVEIDPEIQKVRTEEREQIKLLNNKFASFIDKVQFLEQQNKVLETKWNL
LQQQTTTTSSKNLEPLFETYLSVLRKQLDTLGNDKGRLQSELKTMQDSVEDFKTKYEE
EINKRTAAENDFVVLKKDVDAAYLNKVELEAKVDSLNDEINFLKVLYDAELSQMQTHV
SDTSVVLSMDNNRNLDLDSIIAEVRAQYEEIAQRSKAEAEALYQTKVQQLQISVDQHG
DNLKNTKSEIAELNRMIQRLRAEIENIKKQCQTLQVSVADAEQRGENALKDAHSKRVE
LEAALQQAKEELARMLREYQELMSVKLALDIEIATYRKLLEGEEYRMSGECQSAVSIS
VVSGSTSTGGISGGLGSGSGFGLSSGFGSGSGSGFGFGGSVSGSSSSKIITTTTLNKR
R"
BASE COUNT 413 a 483 c 521 g 356 t
ORIGIN
1 actcaccggc ctgggccctg tcacttctct gatagctccc agctcgctct ctgcagccat
61 gattgccaga cagcagtgtg tccgaggcgg gccccggggc ttcagctgtg gctcggccat
121 tgtaggcggt ggcaagagag gtgccttcag ctcagtctcc atgtctggag gtgctggccg
181 atgctcttct gggggatttg gcagcagaag cctctacaac ctcaggggga acaaaagcat
241 ctccatgagt gtggctgggt cacgacaagg tgcctgcttt ggtggtggat ttgggggctc
301 cttcagtggt aagggtggcc ctggcttccc cgtctgcccc gctgggggaa ttcaggaggt
361 caccatcaac cagagcttgc tcacccccct ccacgtggag attgaccctg agatccagaa
421 agtccggacg gaagagcgcg aacagatcaa gctcctcaac aacaagtttg cctccttcat
481 cgacaaggtg cagttcttag agcaacagaa taaggtcctg gagaccaaat ggaacctgct
541 ccagcagcag acgaccacca cctccagcaa aaaccttgag cccctctttg agacctacct
601 cagtgtcctg aggaagcagc tagatacctt gggcaatgac aaagggcgcc tgcagtctga
661 gctgaagacc atgcaggaca gcgtggagga cttcaagact aagtatgaag aggagatcaa
721 caaacgcaca gcagccgaga atgactttgt ggtcctaaag aaggacgtgg atgctgccta
781 cctgaacaag gtggagttgg aggccaaggt ggacagtctt aatgacgaga tcaacttcct
841 gaaggtcctc tatgatgcgg agctgtccca gatgcagacc catgtcagcg acacgtccgt
901 ggtcctttcc atggacaaca accgcaacct ggacctggac agcattattg ccgaggtccg
961 tgcccagtac gaggagattg cccagaggag caaggctgag gctgaagccc tgtaccagac
1021 caaggtccag cagctccaga tctcggttga ccaacatggt gacaacctga agaacaccaa
1081 gagtgaaatt gcagagctca acaggatgat ccagaggctg cgggcagaga tcgagaacat
1141 caagaagcag tgccagactc ttcaggtatc cgtggctgat gcagagcagc gaggtgagaa
1201 tgcccttaaa gatgcccaca gcaagcgcgt agagctggag gctgccctgc agcaggccaa
1261 ggaggagctg gcacgaatgc tgcgtgagta ccaggagctc atgagtgtga agctggcctt
1321 ggacatcgag atcgccacct accgcaaact gctggagggc gaggagtaca gaatgtctgg
1381 agaatgccag agtgccgtga gcatctctgt ggtcagcggt agcaccagca ctggaggcat
1441 cagcggagga ttaggaagtg gctccgggtt tggcctgagt agtggctttg gctccggctc
1501 tggaagtggc tttgggtttg gtggcagtgt ctctggcagt tccagcagca agatcatcac
1561 taccaccacc ctgaacaaga gacgatagag gagacgaggt ccctgcagct cactgtgtcc
1621 agctgggccc agcactggtg tctctgtgct tccttcactt cacctccatc ctctgtctct
1681 ggggctcatc ttactagtat cccctccact atcccatggg ctctctctgc cccaggatga
1741 tcttctgtgc tgggacaggg actctgcctc ttg
//