LOCUS AK296511 2001 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59709 complete cds, highly similar to Homo
sapiens tweety homolog 2 (TTYH2), transcript variant 1, mRNA.
ACCESSION AK296511
VERSION AK296511.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2001)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2001
/clone="BRTHA3022475"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000491135"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 18..1559
/codon_start=1
/note="highly similar to Homo sapiens tweety homolog 2
(TTYH2), transcript variant 1, mRNA"
/protein_id="BAG59143.1"
/transl_table=1
/translation="MSVVGQDRKSGSGCYLRWLLFLSLLFLGLVAAVCLGLNLIFLVA
YLVCACHCRRDDAVQTKQHHSCCITWTAVVAGLICCAAVGVGFYGNSETNDGAYQLMY
SLDDANHTFSGIDALVSGTTQKMKVDLEQHLARLSEIFAARGDYLQTLKFIQQMAGSV
VVQLSGLPVWREVTMELTKLSDQTGYVEYYRWLSYLLLFILDLVICLIACLGLAKRSK
CLLASMLCCGALSLLLSWASLAADGSAAVATSDFCVAPDTFILNVTEGQISTEVTRYY
LYCSQSGSSPFQQTLTTFQRALTTMQIQVAGLLQFAVPLFSTAEEDLLAIQLLLNSSE
SSLHQLTAMVDCRGLHKDYLDALAGICYDGLQGLLYLGLFSFLAALAFSTMICAGPRA
WKHFTTRNRDYDDIDDDDPFNPQAWRMAAHSPPRGQLHSFCSYSSGLGSQTSLQPPAQ
TISNAPVSEYMNQAMLFGRNPRYENVPLIGRASPPPTYSPSMRATYLSVADEHLRHYG
NQFPA"
BASE COUNT 370 a 640 c 555 g 436 t
ORIGIN
1 agatcgctga gtaggagatg agcgtggtgg gccaggaccg gaagtctggc tctgggtgtt
61 atttaaggtg gctcctgttt ttgtcgctgc tgttcctggg gctggtggcc gccgtctgcc
121 tgggcctgaa cctcatcttc cttgtggctt acctggtctg tgcatgccac tgccggcggg
181 acgatgcggt gcagaccaag cagcaccact cctgctgcat cacctggaca gccgtggtgg
241 ccgggctcat ctgctgtgct gcggtgggcg ttggtttcta tggaaacagc gagaccaacg
301 atggggcgta ccagctgatg tactccttgg acgatgccaa ccacaccttc tctgggatcg
361 atgctctggt ttccggaact acccagaaga tgaaggtgga cctagagcag cacctggccc
421 ggctcagtga gatctttgct gcccggggcg attacctgca gaccctgaag ttcatacagc
481 agatggcggg cagcgttgtt gttcagctct caggactgcc cgtgtggagg gaggtcacca
541 tggagctgac caagctatcc gaccagactg gctacgtgga gtactacagg tggctctcct
601 acctcctgct ctttatcctg gacctggtca tctgcctcat tgcctgcctg ggactggcca
661 agcgctccaa gtgtctcctg gcctcgatgc tgtgctgtgg ggcactgagc ctgctcctca
721 gttgggcatc cctggccgct gatggctctg cggcagtggc caccagtgac ttctgtgtgg
781 ctcctgacac cttcatcctg aacgtcacgg agggccagat cagcacagag gtgactcgct
841 actacctgta ttgcagccag agtggaagca gccccttcca gcagaccctg accaccttcc
901 agcgcgcact taccaccatg cagatccagg tcgcggggct gctgcagttt gccgtgcccc
961 tcttctccac tgcagaggaa gacctgcttg caatccagct cctgctgaac tcctcagagt
1021 ccagccttca ccagctgacc gccatggtgg actgccgagg gctgcacaag gattatctgg
1081 acgctcttgc tggcatctgc tacgacggcc tccagggctt gctgtacctt ggcctcttct
1141 ccttcctggc cgccctcgcc ttctccacca tgatctgtgc agggccaagg gcctggaagc
1201 acttcaccac cagaaacaga gactacgatg acattgatga tgatgacccc tttaaccccc
1261 aagcctggcg catggcggct cacagtcccc cgaggggaca gcttcacagc ttctgcagct
1321 acagcagtgg cctgggaagt cagaccagcc tgcagccccc ggcccagacc atctccaacg
1381 cccctgtctc cgagtacatg aaccaagcca tgctctttgg taggaaccca cgctacgaga
1441 acgtgccact aatcgggaga gcctcccctc cgcctacgta ctctcccagc atgagagcca
1501 cctacctgtc tgtggcggat gagcacctga ggcactacgg gaatcagttt ccagcctaac
1561 agactttcgg gggttcctgc ctcctttttc cgttctggtt tttaattagt gcaaatacaa
1621 gctgcgtttc tttaatagaa accaaaggca tctggagccc gagaggcctc ctgctgtggc
1681 agaggagcag ctgggattcc cgaccaaagc cccagggggt gcagaagact caccacgcgg
1741 gccagcctct ctcttttgcc ctgctctcca caccagaaat gcccccaggt gcttggctgc
1801 ctcagaggta ccatccctga gctggctgcc tggccctgct cacccctacg cctcgccctt
1861 gccaggaggg gagtggcagt gaggaggggg ccaggtcagg caccaccatc aagagagctg
1921 tgtgttctct ctggtcccac aacgatgact ctgcctcttg tcagcccagc caagagccca
1981 gacgacccct ctgtcctcgt t
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