LOCUS AK296508 3246 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56098 complete cds, highly similar to Sodium
bicarbonate transporter-like protein11.
ACCESSION AK296508
VERSION AK296508.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3246)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3246
/clone="BRTHA3022340"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000491132"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 126..2882
/codon_start=1
/note="highly similar to Sodium bicarbonate
transporter-like protein11"
/protein_id="BAG59140.1"
/transl_table=1
/translation="MGVYGPQDRSESEKRDVQRDPPPWHPRREGERPARARSLPLAAA
GQGFLRKTWISEHENSPTMSQNGYFEDSSYYKCDTDDTFEAREEILGDEAFDTANSSI
VSGESIRFFVNVNLEMQATNTENEATSGGCVLLHTSRKYLKLKNFKEEIRAHRDLDGF
LAQASIVLNETATSLDNVLRTMLRRFARDPDNNEPNCNLDLLMAMLFTDAGAPMRGKV
HLLSDTIQGVTATVTGVRYQQSWLCIICTMKALQKRHVCISRLVRPQNWGENSCEVRF
VILVLAPPKMKSTKTAMEVARTFATMFSDIAFRQKLLETRTEEEFKEALVHQRQLLTM
VSHGPVAPRTKERSTVSLPAHRHPEPPKCKDFVPFGKGIREDIARRFPLYPLDFTDGI
IGKNKAVGKYITTTLFLYFACLLPTIAFGSLNDENTDGAIDVQKTIAGQSIGGLLYAL
FSGQPLVILLTTAPLALYIQVIRVICDDYDLDFNSFYAWTGLWNSFFLALYAFFNLSL
VMSLFKRSTEEIIALFISITFVLDAVKGTVKIFWKYYYGHYLDDYHTKRTSSLVSLSG
LGASLNASLHTALNASFLASPTELPSATHSGQATAVLSLLIMLGTLWLGYTLYQFKKS
PYLHPCVREILSDCALPIAVLAFSLISSHGFREIEMSKFRYNPSESPFAMAQIQSLSL
RAVSGAMGLGFLLSMLFFIEQNLVAALVSAPENRLVKGTAYHWDLLLLAIINTGLSLF
GLPWIHAAYPHSPLHVRALALVEERVENGHIYDTIVNVKETRLTSLGASVLVGLSLLL
LPVPLQWIPKPVLYGLFLYIALTSLDGNQLVQRVALLLKEQTAYPPTHYIRRVPQRKI
HYFTGLQVLQLLLLCAFGMSSLPYMKMIFPLIMIAMIPIRYILLPRIIEAKYLDVMDA
EHRP"
BASE COUNT 635 a 1025 c 898 g 688 t
ORIGIN
1 cccttttgga ccaacggctc tggcttccag gcggccggga cgcggtccca ggactggaga
61 ccgttgcctg tcggcccccg tgtgacccgg ggcgcgtgac gggggtcggg ggaactgcgc
121 ctgcaatggg cgtttatggc ccccaggacc ggtctgagag tgagaagagg gatgtgcaga
181 gagatccccc gccttggcat ccgaggagag agggggagag gcccgctcgg gcccggtccc
241 ttcctctcgc tgcagcgggg cagggttttc tcaggaaaac ctggattagc gaacatgaaa
301 actctcccac catgtcgcag aatggatact tcgaggattc aagctactac aagtgtgaca
361 cagatgacac cttcgaagcc cgagaggaga tcctggggga tgaggccttc gacactgcca
421 actcctccat cgtgtctggc gagagtatcc gtttttttgt caatgtcaac cttgagatgc
481 aggccaccaa cactgagaat gaagcgactt ccggtggctg tgtgctcctg cacacctccc
541 gaaagtacct gaagttaaag aacttcaagg aagagatccg tgcgcaccgc gacctagatg
601 gcttcctggc gcaggccagc atcgtcctga acgagacggc cacctccctg gataacgtgc
661 tgcggaccat gcttcgccgc ttcgccaggg accctgacaa caatgagccc aactgcaacc
721 tggacctgct catggccatg ctcttcaccg atgccggggc acccatgcgg ggtaaagtcc
781 acctgctgtc agataccatc caaggggtca ccgccacagt gacaggggtg cggtaccagc
841 agtcgtggct ctgcatcatc tgtaccatga aggccctaca gaagcggcac gtgtgcatca
901 gccgcctggt tcgcccacag aactgggggg agaattcctg tgaggttcgg ttcgtcatcc
961 tggtgctggc cccacccaag atgaaaagca ctaagactgc gatggaggtg gcgcgcacgt
1021 ttgccaccat gttctcggat atcgccttcc gccagaagct cctggagacc cgcacagagg
1081 aggaattcaa ggaggccttg gtgcatcaga gacagctgct caccatggtg agccacggtc
1141 cagtggcgcc gagaacgaag gaacgcagca cagtctccct ccctgcccac agacacccag
1201 agcccccaaa gtgcaaggac tttgtccctt ttgggaaggg catccgggag gacatcgcac
1261 gcaggttccc cttgtacccc ttggacttca ctgatggcat tattgggaaa aacaaggctg
1321 tgggcaaata catcaccacc accctgttcc tctacttcgc ctgcctcctg cccaccatcg
1381 ctttcgggtc tctcaatgac gagaacacag acggggccat cgacgtgcag aagaccatag
1441 ccgggcagag catcgggggc ctgctctacg cgctcttctc tgggcagcca ttggtgattc
1501 tgctgaccac cgcgcccctg gcgctctaca tccaggtgat tcgtgtcatc tgtgatgact
1561 atgacctgga cttcaactcc ttctacgcat ggacgggcct gtggaatagt ttcttccttg
1621 cgctttatgc ctttttcaac ctcagcctgg tcatgagtct cttcaagagg tcgacggagg
1681 agatcatcgc cctcttcatt tccatcacgt ttgtgctgga tgccgtcaag ggcacggtta
1741 aaatcttctg gaagtactac tatgggcatt acttggacga ctatcacaca aaaaggactt
1801 catcccttgt cagcctgtca ggcctcggcg ccagcctcaa cgccagcctc cacactgccc
1861 tcaacgccag cttcctcgcc agccccacgg agctgccctc ggccacacac tcaggccagg
1921 cgaccgccgt gctcagcctc ctcatcatgc tgggcacgct ctggctgggc tacaccctct
1981 accaattcaa gaagagcccc tacctgcacc cctgcgtgcg agagatcctg tccgactgcg
2041 ccctgcccat cgcggtgctc gccttctccc tcatcagctc ccatggcttc cgggaaatcg
2101 agatgagcaa gttccgctac aaccccagcg agagcccctt tgcgatggcg cagatccagt
2161 cgctgtccct gagggccgtc agcggtgcca tgggcctcgg cttcctgctg tccatgctct
2221 tcttcatcga gcagaacttg gtggccgcct tggtgagtgc accggagaac aggctggtga
2281 agggcactgc ctaccactgg gacctcctgc tcctcgccat catcaacaca gggctgtctc
2341 tgtttgggct gccttggatc catgccgcct acccccactc cccgctgcac gtgcgagccc
2401 tggccttagt ggaggagcgt gtggagaacg gacacatcta tgacacgatt gtgaacgtga
2461 aggagacgcg gctgacctcg ctgggcgcca gcgtcctggt gggcctgtcc ctgttgctgc
2521 tgccggtccc gcttcagtgg atccccaagc ccgtgctcta tggcctcttc ctctacatcg
2581 cgctcacctc cctcgatggc aaccagctcg tccagcgcgt ggccctgctg ctcaaggagc
2641 agactgcgta ccccccgaca cactacatcc ggagggtgcc ccagaggaag atccactact
2701 tcacgggcct gcaggtgctt cagctgctgc tgctgtgtgc cttcggcatg agctccctgc
2761 cctacatgaa gatgatcttt cccctcatca tgatcgccat gatccccatc cgctatatcc
2821 tgctgccccg aatcattgaa gccaagtact tggatgtcat ggacgctgag cacaggcctt
2881 gactggcaga ccctgcccac gccccattcg ccagccctcc acgtcctccc aggctggctc
2941 tggagctgtg aggggaggtg taggtgtgtg ggtgactgct ctgtgctgcg ccttctcatg
3001 gctgactcag gcctggggca tctgggcatt gtaggggtgc agtggtatgt gcccacccct
3061 ctcccattat cctttagctt taggccaaga gcgttgctca gggcagcttc tgcccagggt
3121 gggtgggact gagcaggatg gattttcttt tgataaaaga gtcgatgcct gaaagagaaa
3181 ccatttcctt gattgtgtaa ggaacttgct ggacgcacat tagagaataa agctcctgtt
3241 tctagg
//