LOCUS AK296503 1487 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ56987 complete cds, highly similar to Homo sapiens immunoglobulin superfamily, member 11 (IGSF11), transcript variant 2, mRNA. ACCESSION AK296503 VERSION AK296503.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1487) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1487 /clone="BRTHA3021510" /clone_lib="BRTHA3" /db_xref="H-InvDB:HIT000491127" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thalamus" CDS 147..1358 /codon_start=1 /note="highly similar to Homo sapiens immunoglobulin superfamily, member 11 (IGSF11), transcript variant 2, mRNA" /protein_id="BAG59136.1" /transl_table=1 /translation="MTSQRSPLAPLLLLSLHGVAASLEVSESPGSIQVARGQTAVLPC TFTTSAALINLNVIWMVTPLSNANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATN VSIFINNTQLSDTGTYQCLVNNLPDIGGRNIGVTGLTVLVPPSAPHCQIQGSQDIGSD VILLCSSEEGIPRPTYLWEKLDNTLKLPPTATQDQVQGTVTIRNISALSSGLYQCVAS NAIGTSTCLLDLQVISRAFFYWRSKNKEEEEEEIPNEIREDDLPPKCSSAKAFHTEIS SSDNNTLTSSNAYNSRYWSNNPKVHRNTESVSHFSDLGQSFSFHSGNANIPSIYANGT HLVPGQHKTLVVTANRGSSPQVMSRSNGSVSRKPRPPHTHSYTISHATLERIGAVPVM VPAQSRAGSLV" BASE COUNT 377 a 418 c 362 g 330 t ORIGIN 1 agtcccagct ctgcgcgggg aacagcggcc cggcgctggg tgtgggagga ccaggctgcc 61 ccaagagcgc ggagactcac gcccgctcct ctcctgttgc gaccgggagc cgggtaggag 121 gcaggcgcgc tccctgcggc cccgggatga cttctcagcg ttcccctctg gcgcctttgc 181 tgctcctctc tctgcacggt gttgcagcat ccctggaagt gtcagagagc cctgggagta 241 tccaggtggc ccggggtcag acagcagtcc tgccctgcac tttcactacc agcgctgccc 301 tcattaacct caatgtcatt tggatggtca ctcctctctc caatgccaac caacctgaac 361 aggtcatcct gtatcagggt ggacagatgt ttgatggtgc cccccggttc cacggtaggg 421 taggatttac aggcaccatg ccagctacca atgtctctat cttcattaat aacactcagt 481 tatcagacac tggcacctac cagtgcctgg tcaacaacct tccagacata gggggcagga 541 acattggggt caccggtctc acagtgttag ttcccccttc tgccccacac tgccaaatcc 601 aaggatccca ggatattggc agcgatgtca tcctgctctg tagctcagag gaaggcattc 661 ctcgaccaac ttacctttgg gagaagttag acaataccct caaactacct ccaacagcta 721 ctcaggacca ggtccaggga acagtcacca tccggaacat cagtgccctg tcttcaggtt 781 tgtaccagtg cgtggcttct aatgctattg gaaccagcac ctgtcttctg gatctccagg 841 ttatttcacg ggcattcttt tactggagaa gcaaaaataa agaggaggaa gaagaagaaa 901 ttcctaatga aataagagag gatgatcttc cacccaagtg ttcttctgcc aaagcatttc 961 acactgagat ttcctcctcg gacaacaaca cactaacctc ttccaatgcc tacaacagtc 1021 gatactggag caacaatcca aaagttcata gaaacacaga gtcagtcagc cacttcagtg 1081 acttgggcca atctttctct ttccactcag gcaatgccaa cataccatcc atttatgcta 1141 atgggaccca tctggtcccg ggtcaacata agactctggt agtgacagcc aacagagggt 1201 catcaccaca ggtgatgtcc aggagcaatg gctcagtcag taggaagcct cggcctccac 1261 acactcattc ctacaccatc agccacgcaa cactggaacg aattggtgca gtacctgtca 1321 tggtaccagc ccagagtcgg gccgggtcct tggtatagga catgaggaaa tgttgtgttc 1381 agaaatgaat aaatggaatg ccctcataca agggggaggg tggggtgggg agtgctggga 1441 aagaaacact tccttataat tatattagta aaatgcacaa agaagaa //