LOCUS AK296458 2397 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51676 complete cds, highly similar to
Extracellular matrix protein 2 precursor.
ACCESSION AK296458
VERSION AK296458.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2397)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2397
/clone="BRTHA3016252"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000491082"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 91..2124
/codon_start=1
/note="highly similar to Extracellular matrix protein 2
precursor"
/protein_id="BAG59105.1"
/transl_table=1
/translation="MKIAVLFCFFLLIIFQTDFGKNEEIPRKQRRKIYHRRLRKSSTS
HKHRSNRQLGIPQTTVFTPVARLPIVNFDYSMEEKFESFSSFPGVESSYNVLPGKKGH
CLVKGITMYNKAVWSPEPCTTCLCSDGRVLCDETMCHPQRCPQTVIPEGECCPVCSAT
EQREPTNLLHKQLPPPQVGMDRIVRKEALQSEEDEEVKEEDTEQKRETPESRNQGQLY
SEGDSRGGDRKQRPGEERRLAHQQQRQGREEEEDEEEEGEEGEEDEEDEEDPVRGDMF
RMPSRSPLPAPPRGTLRLPSGCSLSYRTISCINAMLTQIPPLTAPQITSLELTGNSIA
SIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKLLKKLMRLNMDGNNLIQIPSQLPS
TLEELKVNENNLQAIDEESLSDLNQLVTLELEGNNLSEANVNPLAFKPLKSLAYLRLG
KNKFRIIPQGLPGSIEELYLENNQIEEITEICFNHTRKINVIVLRYNKIEENRIAPLA
WINQENLESIDLSYNKLYHVPSYLPKSLLHLVLLGNQIERIPGYVFGHMEPGLEYLYL
SFNKLADDGMDRVSFYGAYHSLRELFLDHNDLKSIPPGIQEMKALHFLRLNNNKIRNI
LPEEICNAEEDDDSNLEHLHLENNYIKIREIPSYTFSCIRSYSSIVLKPQNIK"
BASE COUNT 796 a 493 c 497 g 611 t
ORIGIN
1 gtttcatttt cagctggaga cttaaatgac accaagcaaa gcctacttag tttagatctc
61 cagaaattgg ctggtggaaa aaaatcaaac atgaagattg cagttttgtt ttgttttttt
121 ctgcttatca tttttcaaac tgactttgga aaaaatgaag aaattcctag gaagcaaagg
181 aggaagatct accacagaag gttgaggaaa agttcaacct cacacaagca cagatcaaac
241 agacagcttg gaattccgca aacaacagtt tttacaccag tagcaagact tcctattgtt
301 aactttgatt atagcatgga ggaaaagttt gaatcctttt caagttttcc tggagtagaa
361 tcaagctata atgtgttacc aggaaagaag ggacactgtt tggtaaaggg cataaccatg
421 tacaacaaag ctgtgtggtc gcctgagccc tgcactacct gcctctgctc agatggaaga
481 gttctttgtg atgaaaccat gtgccatccc cagaggtgcc cccaaacagt tatacctgaa
541 ggggaatgct gccctgtctg ctccgctact gaacaaagag aacctaccaa tttacttcat
601 aagcaactgc cacctcctca ggtgggaatg gaccgaatag taagaaaaga agcacttcaa
661 tctgaggagg atgaagaagt gaaagaagaa gatacagagc aaaagagaga gacccctgaa
721 tctagaaatc aggggcaact ttacagtgag ggggacagca gaggaggaga cagaaagcag
781 aggcctggag aggagaggag gctggcacac cagcaacaac gccaaggaag ggaggaggag
841 gaggatgagg aggaggaggg tgaggagggt gaggaggatg aggaggacga ggaggacccg
901 gtaagaggag atatgttccg aatgccctct cgatccccgc ttcctgctcc tcccagaggc
961 acactgcgcc tgccaagcgg gtgctctctg tcctacagga ccatcagctg catcaacgcc
1021 atgcttaccc agataccacc gctgacagca ccacagataa caagtctgga gctcactggc
1081 aattccatcg cctccatccc agatgaagca tttaatggat taccaaattt ggaaaggctt
1141 gatctgagca aaaataatat cacttcttca ggcataggtc caaaagcatt caagcttctg
1201 aagaagttaa tgcgtttgaa tatggatgga aataatttga tacagattcc ttcacaattg
1261 ccatctacat tagaagaact taaagtcaat gagaacaatc ttcaggctat cgatgaagaa
1321 agtttatcag acttaaatca gttggtcacc ttagaattgg aaggaaacaa tctcagtgaa
1381 gccaatgtca atcctttagc tttcaaacct ttgaagagcc tagcctactt gcgtctggga
1441 aaaaataaat ttagaattat accgcagggt cttcctggtt ctattgagga attataccta
1501 gaaaataacc aaattgaaga aataactgaa atttgtttca atcataccag aaagatcaat
1561 gtcattgtac tacgttataa caaaattgaa gaaaatagga ttgctccttt agcctggata
1621 aatcaagaaa atctagaatc cattgatctc tcctacaaca agctctatca cgtcccgtcc
1681 tatctaccca agtccttgct gcacctagta ctccttggga accagattga acggatccct
1741 ggctatgtgt ttggccacat ggaaccaggc ctggaatact tgtacctgtc atttaacaaa
1801 cttgctgatg atggcatgga ccgtgtctcc ttctatgggg catatcattc tctgagagaa
1861 ttatttctgg atcacaatga cttaaaatct ataccacctg ggatacaaga aatgaaagca
1921 ctacattttc tgaggctgaa caacaacaag atacggaaca ttcttccaga agaaatttgc
1981 aatgctgaag aggatgatga ctcaaatctg gaacatcttc atcttgaaaa caattatatt
2041 aaaattagag aaataccatc ttacacattt tcatgcataa gatcatactc aagtatcgtt
2101 cttaaaccac aaaacatcaa gtaattccaa gttttccttt gctgtttata aactttactc
2161 atgtatttgt agtagctgca tttgtcatta ataagagaga cataatcctc ctgttatact
2221 cagtatcatt atatgctagt caacctgatt cactaacaca cagatgaaca accaaaatat
2281 acctaaaagg tatagtctct aggagtttta ttaatagtaa aggtaaaatc tctcagtttc
2341 ctacctctag aaagaggcca tctcactaga ataggatatt atgcatactg agctaga
//