LOCUS AK296425 1375 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61623 complete cds, highly similar to
Peroxisome proliferator-activated receptor delta.
ACCESSION AK296425
VERSION AK296425.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1375)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1375
/clone="BRTHA3014475"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000491049"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 155..1363
/codon_start=1
/note="highly similar to Peroxisome
proliferator-activated receptor delta"
/protein_id="BAH12347.1"
/transl_table=1
/translation="MHQRDLSRSSSPPSLLDQLQMGCDGASCGSLNMECRVCGDKASG
FHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLALGMSHN
AIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKKKARS
ILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETV
RELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAI
QDTILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHP
LLQEIYKDMY"
BASE COUNT 318 a 403 c 394 g 260 t
ORIGIN
1 aatgggaaaa gttttggcag gagcgggaga attctgcgga gcctgcggga cggcggcggt
61 ggcgccgtag gcagccggga cagtgttgta cagtgttttg ggcatgcacg tgatactcac
121 acagtggctt ctgctcacca acagatgaag acagatgcac caacgagacc tctcccggag
181 ctcctcgcca ccctcactgc tggaccaact gcagatgggc tgtgacgggg cctcatgcgg
241 cagcctcaac atggagtgcc gggtgtgcgg ggacaaggca tcgggcttcc actacggtgt
301 tcatgcatgt gaggggtgca agggcttctt ccgtcgtacg atccgcatga agctggagta
361 cgagaagtgt gagcgcagct gcaagattca gaagaagaac cgcaacaagt gccagtactg
421 ccgcttccag aagtgcctgg cactgggcat gtcacacaac gctatccgtt ttggtcggat
481 gccggaggct gagaagagga agctggtggc agggctgact gcaaatgagg ggagccagta
541 caacccacag gtggccgacc tgaaggcctt ctccaagcac atctacaatg cctacctgaa
601 aaacttcaac atgaccaaaa agaaggcccg cagcatcctc accggcaaag ccagccacac
661 ggcgcccttt gtgatccacg acatcgagac attgtggcag gcagagaagg ggctggtgtg
721 gaagcagttg gtgaatggcc tgcctcccta caaggagatc agcgtgcacg tcttctaccg
781 ctgccagtgc accacagtgg agaccgtgcg ggagctcact gagttcgcca agagcatccc
841 cagcttcagc agcctcttcc tcaacgacca ggttaccctt ctcaagtatg gcgtgcacga
901 ggccatcttc gccatgctgg cctctatcgt caacaaggac gggctgctgg tagccaacgg
961 cagtggcttt gtcacccgtg agttcctgcg cagcctccgc aaacccttca gtgatatcat
1021 tgagcctaag tttgaatttg ctgtcaagtt caacgccctg gaacttgatg acagtgacct
1081 ggccctattc attgcggcca tcattctgtg tggagaccgg ccaggcctca tgaacgttcc
1141 acgggtggag gctatccagg acaccatcct gcgtgccctc gaattccacc tgcaggccaa
1201 ccaccctgat gcccagtacc tcttccccaa gctgctgcag aagatggctg acctgcggca
1261 actggtcacc gagcacgccc agatgatgca gcggatcaag aagaccgaaa ccgagacctc
1321 gctgcaccct ctgctccagg agatctacaa ggacatgtac taacggcggc accca
//