LOCUS AK296412 2557 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54490 complete cds, highly similar to Protein
kinase C gamma type (EC 2.7.11.13).
ACCESSION AK296412
VERSION AK296412.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2557)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2557
/clone="BRTHA3013005"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000491036"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 875..2413
/codon_start=1
/note="highly similar to Protein kinase C gamma type (EC
2.7.11.13)"
/protein_id="BAH12345.1"
/transl_table=1
/translation="MDPNGLSDPYVKLKLIPDPRNLTKQKTRTVKATLNPVWNETFVF
NLKPGDVERRLSVEVWDWDRTSRNDFMGAMSFGVSELLKAPVDGWYKLLNQEEGEYYN
VPVADADNCSLLQKFEACNYPLELYERVRMGPSSSPIPSPSPSPTDPKRCFFGASPGR
LHISDFSFLMVLGKGSFGKVMLAERRGSDELYAIKILKKDVIVQDDDVDCTLVEKRVL
ALGGRGPGGRPHFLTQLHSTFQTPDRLYFVMEYVTGGDLMYHIQQLGKFKEPHAVFYA
AEIAIGLFFLHNQGIIYRDLKLDNVMLDAEGHIKITDFGMCKENVFPGTTTRTFCGTP
DYIAPEIIAYQPYGKSVDWWSFGVLLYEMLAGQPPFDGEDEEELFQAIMEQTVTYPKS
LSREAVAICKGFLTKHPGKRLGSGPDGEPTIRAHGFFRWIDWERLERLEIPPPFRPRP
CGRSGENFDKFFTRAAPALTPPDRLVLASIDQADFQGFTYVNPDFVHPDARSPTSPVP
VPVM"
BASE COUNT 467 a 859 c 718 g 513 t
ORIGIN
1 ctccccccac ccggggctcc cacatttcag caggtgccgg agctggagct cccaccgccg
61 ccgcccgtgc ctccggctgc cggcgcccct gcctttggct cttcctcccc actcgcccgc
121 tccccctggc ggagccggcg cgcccggggt gccgctccct gcctggcgcg ctccgcacct
181 ggaggtgcct tgcccctctc ctgcccacct cggaatttcc ctgtggctcc tttgatcctt
241 cgagtctcca gctcctctcc cttccacctg tttcccccaa gaaaggcagg atcctggtcc
301 ctgctacgtt tctggggcca tggctggtct gggccccggc gtaggcgatt cagagggggg
361 accccggccc ctgttttgca gaaagggggc tctgaggcag aaggtggtcc acgaagtcaa
421 gagccacaag ttcaccgctc gcttcttcaa gcagcccacc ttctgcagcc actgcaccga
481 cttcatctgg ggtatcggaa agcagggcct gcaatgtcaa gtctgcagct ttgtggttca
541 tcgacgatgc cacgaatttg tgaccttcga gtgtccaggc gctgggaagg gcccccagac
601 ggacgacccc cggaacaaac acaagttccg cctgcatagc tacagcagcc ccaccttctg
661 cgaccactgt ggctccctcc tctacgggct tgtgcaccag ggcatgaaat gctcctgctg
721 cgagatgaac gtgcaccggc gctgtgtgcg tagcgtgccc tccctgtgcg gtgtggacca
781 caccgagcgc cgcgggcgcc tgcagctgta gatccgggct cccacagcag atgagatcca
841 cgtaactgtt ggcgaggccc gtaacctaat tcctatggac cccaatggtc tctctgatcc
901 ctatgtgaaa ctgaagctca tcccagaccc tcggaacctg acgaaacaga agacccgaac
961 ggtgaaagcc acgctaaacc ctgtgtggaa tgagaccttt gtgttcaacc tgaagccagg
1021 ggatgtggag cgccggctca gcgtggaggt gtgggactgg gaccggacct cccgcaacga
1081 cttcatgggg gccatgtcct ttggcgtctc ggagctgctc aaggcgcccg tggatggctg
1141 gtacaagtta ctgaaccagg aggagggcga gtattacaat gtgccggtgg ccgatgctga
1201 caactgcagc ctcctccaga agtttgaggc ttgtaactac cccctggaat tgtatgagcg
1261 ggtgcggatg ggcccctctt cctctcccat cccctcccct tcccctagtc ccaccgaccc
1321 caagcgctgc ttcttcgggg cgagtccagg acgcctgcac atctccgact tcagcttcct
1381 catggttcta ggaaaaggca gttttgggaa ggtgatgctg gccgagcgca ggggctctga
1441 tgagctctac gccatcaaga tcttgaaaaa ggacgtgatc gtccaggacg acgatgtgga
1501 ctgcacgctg gtggagaaac gtgtgctggc gctggggggc cggggtcctg gcggccggcc
1561 ccacttcctc acccagctcc actccacctt ccagaccccg gaccgcctgt atttcgtgat
1621 ggagtacgtc accgggggag acttgatgta ccacattcaa cagctgggca agtttaagga
1681 gccccatgca gtgttctacg cggcagaaat cgctatcggc ctcttcttcc ttcacaatca
1741 gggcatcatc tacagggacc tgaagctgga caatgtgatg ctggatgctg agggacacat
1801 caagatcact gactttggca tgtgtaagga gaacgtcttc cccgggacga caacccgcac
1861 cttctgcggg accccggact acatagcccc ggagatcatt gcctaccagc cctatgggaa
1921 gtctgtcgat tggtggtcct ttggagttct gctgtatgag atgttggcag gacagcctcc
1981 cttcgatggg gaggacgagg aggagctgtt tcaggccatc atggaacaaa ctgtcaccta
2041 ccccaagtcg ctttcccggg aagccgtggc catctgcaag gggttcctga ccaagcaccc
2101 agggaagcgc ctgggctcag ggcctgatgg ggaacctacc atccgtgcac atggcttttt
2161 ccgctggatt gactgggagc ggctggaacg attggagatc ccgcctcctt tcagaccccg
2221 cccgtgtggc cgcagcggcg agaactttga caagttcttc acgcgggcgg cgccagcgct
2281 gacccctcca gaccgcctag tcctggccag catcgaccag gccgatttcc agggcttcac
2341 ctacgtgaac cccgacttcg tgcacccgga tgcccgcagc cccaccagcc cagtgcctgt
2401 gcccgtcatg taatctcacc cgccgccact aggtgtcccc aacgtcccct ccgccgtgcc
2461 ggcggcagcc ccacttcacc cccaacttca ccaccccctg tcccattcta gatcctgcac
2521 cccagcattc cagctctgcc cccgcgggtt ctagacg
//