LOCUS AK296404 3470 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61302 complete cds, highly similar to
Glutamate receptor, ionotropic kainate 1 precursor.
ACCESSION AK296404
VERSION AK296404.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3470)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3470
/clone="BRTHA3012152"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000491028"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 498..3260
/codon_start=1
/note="highly similar to Glutamate receptor, ionotropic
kainate 1 precursor"
/protein_id="BAH12343.1"
/transl_table=1
/translation="MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIFE
TVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLAL
GVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYINLYPDYAAISRA
ILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKE
MKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN
MTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIA
SHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDI
ISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLI
VTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQN
DKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPG
VFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLL
NSFWFGVGALMRQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP
IDSADDLAKQTKIEYGAVRDGSTMTLFKKSKISTYEKMWAFMSSRQQTALVRNSDEGI
QRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAIL
QLQEEGKLHMMKEKWWRGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIGE
FIYKSRKNNDIEQCLSFNAIMEELGISLKNQKKIKKKSRTKGKSSFTSILTCHQRRTQ
RKETVA"
BASE COUNT 949 a 833 c 844 g 844 t
ORIGIN
1 cagttaacct gctggagctc atcaggcttg ctcagagccc ctgcaccaac tcaccctgta
61 ccctctctcc ttcttcgtta gtcttctttc ccccttttcc ctcctctgtc tgtgcctatc
121 ccccgacttt tgcatctgac caaaggacga atgagggaga cgttcctgca gatcggggca
181 gcaactttcc tcagctggtc tctgggctcc gggagccaga gagcgctgat cctccgcggt
241 ctgcggccca tggaagagga ggaggaggag ccgtgatggg ctagcgacag cactgaggag
301 ccccgagaga gctcagcctt gccagccagc tccgcggtcc cacgcgggtt ccctcgagct
361 cgctccgtgg ggagcgcgca gcgtgcttgg aactggagca tccagagagg atgaggcggg
421 gacccggccc aagttgggtg catctctcgg gcgtccggca gcggctgtat ctcggcatga
481 attaagaagc taggaagatg gagcacggca cactcctcgc ccagcccggg ctctggacca
541 gggacaccag ctgggcactc ctctatttcc tctgctatat cctccctcag accgccccgc
601 aagtactcag gatcggaggg atttttgaaa cagtggaaaa tgagcctgtt aatgttgaag
661 aattagcttt caagtttgca gtcaccagca ttaacagaaa ccgaaccctg atgcctaaca
721 ccacattaac ctatgacatc cagagaatta acctttttga tagttttgaa gcctcgcgga
781 gagcatgtga ccagctggct cttggtgtgg ctgctctctt tggcccttcc catagctcct
841 ccgtcagtgc tgtgcagtct atttgcaatg ctctcgaagt tccacacata cagacccgct
901 ggaaacaccc ctcggtggac aacaaagatt tgttttacat caacctttac ccagattatg
961 cagctatcag cagggcgatc ctggacctgg tcctctatta caactggaaa acggtgacag
1021 tggtgtatga agacagcaca ggtctaattc gtctacaaga gctcatcaaa gctccctcca
1081 gatataatat taaaatcaaa atccgccagc tgccctctgg gaataaagat gccaagcctt
1141 tactcaagga gatgaagaaa ggcaaggagt tctatgtgat atttgattgt tcacatgaaa
1201 cagccgctga aatccttaag cagattctgt tcatgggcat gatgaccgag tactatcact
1261 actttttcac aaccctggac ttatttgctt tggatctgga actctatagg tacagtggcg
1321 taaacatgac cgggtttcgg ctgcttaaca ttgacaaccc tcacgtgtca tccatcattg
1381 agaagtggtc catggagaga ctgcaggccc cacccaggcc cgagactggc cttttggatg
1441 gcatgatgac aactgaagcg gctctgatgt acgatgctgt gtacatggtg gccattgcct
1501 cgcaccgggc atcccagctg accgtcagct ccctgcagtg ccatagacat aagccatggc
1561 gcctcggacc cagatttatg aacctgatca aagaggcccg gtgggatggc ttgactgggc
1621 atatcacctt taataaaacc aatggcttga ggaaggattt tgatctggac attattagtc
1681 tcaaagagga aggaactgaa aaggctgctg gcgaagtgtc taaacacttg tataaagtgt
1741 ggaagaagat tgggatttgg aattccaaca gtgggcttaa catgacggac agcaacaaag
1801 acaagtccag caatatcact gattcattgg ccaacagaac actcattgtc accaccattc
1861 tggaagaacc ctatgttatg tacaggaaat ctgataagcc tctatatgga aatgacagat
1921 ttgaaggata ttgcctagac ctgttgaaag aattgtcaaa catcctgggt ttcatttatg
1981 atgttaaact agttcccgat ggcaaatatg gggcccagaa tgacaaaggg gagtggaacg
2041 ggatggttaa agaactcata gatcacaggg ctgacctggc agtggctcct cttaccatca
2101 cctacgtgcg ggagaaagtc attgacttct ccaaaccctt catgacccta ggcatcagca
2161 ttctctaccg gaagcccaat ggtaccaatc caggcgtttt ctccttcctc aaccccctgt
2221 ctccagatat ttggatgtat gtgctcttag cctgcttggg agtcagctgt gtactctttg
2281 tgattgcaag gtttacaccc tacgagtggt ataaccccca cccatgcaac cctgactcag
2341 acgtggtgga aaacaatttt actttactaa atagtttctg gtttggagtt ggagctctca
2401 tgcggcaagg atcagagctg atgcccaaag ctctatcgac cagaatagtt ggagggatat
2461 ggtggttttt caccctaatc atcatttcat cctacacggc caatctggct gccttcttga
2521 cagtagagag aatggaatcc cccatagatt cggcagatga tctggcaaag caaaccaaga
2581 tagaatatgg ggcggttaga gatggatcaa caatgaccct cttcaagaaa tcaaaaatct
2641 ccacctatga gaagatgtgg gctttcatga gcagcaggca gcagaccgcc ctggtaagaa
2701 acagtgatga ggggatccag agagtgctca ccacagacta cgcgctgctg atggagtcca
2761 ccagcattga gtatgtgacg cagagaaact gcaacctcac tcagatcggg ggcctcattg
2821 actccaaagg ttacggagtg ggaacaccta ttggttctcc ttaccgggat aaaattacta
2881 ttgctattct tcaactccaa gaagaaggga agctgcatat gatgaaagag aagtggtggc
2941 gtgggaatgg ctgccccgag gaagacaaca aagaagccag tgccctggga gtggaaaata
3001 ttggaggcat cttcattgtt ctggctgccg gactggtcct ttctgtattt gtagctattg
3061 gagaattcat atacaaatca cggaagaata atgatattga acagtgtctc tctttcaacg
3121 ctatcatgga agaactggga atctcactga agaatcagaa aaaaataaag aaaaagtcaa
3181 gaactaaggg gaaatcttcc ttcacaagta tccttacttg tcatcagaga cgaactcaga
3241 gaaaagagac tgtggcgtga tccaaggaaa cgcctgtagg aagaaaaagg atgcattccc
3301 tacagatttt tggagaaagg atttctgagg agtgtgtgat gtgtttccat atatctatat
3361 ccataactct gattatgaat acagatataa gaaatacaaa agtttaaaaa gctcacatag
3421 atatgacttg ggaagtgaca ccagttcttt taaaataaat ttgtatgctc
//