LOCUS AK296397 2130 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50787 complete cds, highly similar to HECT
domain and RCC1-like domain protein 3.
ACCESSION AK296397
VERSION AK296397.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2130)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2130
/clone="BRTHA3011503"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000491021"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 372..1856
/codon_start=1
/note="highly similar to HECT domain and RCC1-like domain
protein 3"
/protein_id="BAG59064.1"
/transl_table=1
/translation="MKLVNLYKGAVLYLLRGRKTFLIPVLFNNYITAALKLLEKLYKV
NLKVKHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKARPSIIQDTVTLCSYPFIFD
AQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDAL
RDLSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNL
LWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSP
TEGRSLQELLDYPGEDVEETFCLNFTICRESYGVIEQKKLIPGGDNVTVCKDNRQEFV
DAYVNYVFQISVHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEELEET
AIYKGDYSATHPTVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTA
SGEEYLPVAHTCYNLLDLPKYSSKEILSARLTQALDNYEGFSLA"
BASE COUNT 594 a 434 c 485 g 617 t
ORIGIN
1 agccagggga gaagatttct tacttctgtg acacaattaa aatggatagg tacccactct
61 gaagtgtatt ctgcgacagt agaaaagggg atcaaggaga aacttcaatt aatgaaaaat
121 atgctttcgg aatttttttt ttgacagatc gctttaaata tcatatcgtt aagcagatct
181 tctctggagg agaccagact tttgtacttt gctccaaata cgagaattga tgaacatttt
241 aaaacgagtc ccaaaatccc tgggattgac ctgaactcaa ctagggtgtt atttgagaag
301 ttaatgaact ctcagcactc catgattcta gaacagataa ctggtggtct caggtatgcc
361 cgaaatattt catgaagctg gtaaacctct ataaaggtgc agtcctttat ctactgaggg
421 gaagaaagac attcttaatt cccgtactgt ttaacaatta tatcacagca gctctcaaac
481 tcttggagaa gttatataag gtaaatctta aagtgaagca tgtggaatat gatacatttt
541 acattcctga gatttccaat ctcgtggaca ttcaggaaga ctacctcatg tggttcttgc
601 atcaagcagg gatgaaggct agaccatcaa taatacagga tactgtaaca ctttgttcct
661 accctttcat ctttgatgcc caagccaaga ccaaaatgtt acagacagat gctgaactac
721 agatgcaggt ggcagtcaat ggagccaacc tgcagaatgt cttcatgctt ctcaccctgg
781 agcctctgct ggccagaagc cccttcctgg tccttcacgt tcgcaggaac aaccttgttg
841 gagatgccct aagagatctg agcattcatt ctgatattga tttgaaaaag cctctcaaag
901 taatctttga tggtgaagaa gcagtggatg ccggtggtgt tacaaaggaa ttttttcttt
961 tgctgttaaa agaacttttg aatcccatct atggaatgtt tacctactat caagattcaa
1021 atctcttgtg gttttcagac acgtgttttg tagagcacaa ctggtttcac ttgattggta
1081 taacctgtgg actagctatc tacaactcca ctgtggtcga tctccacttc ccattggctc
1141 tctacaagaa gttactcaat gtaaagcctg gcttggaaga cttaaaggag ttgtcaccca
1201 ctgaaggaag gagtctccaa gagcttttag attaccccgg ggaggatgtg gaggagactt
1261 tctgcctcaa cttcacgatc tgccgagaaa gctatggagt gattgaacag aagaagctga
1321 tacctggggg agataatgta actgtgtgca aggataacag gcaggaattt gtggatgctt
1381 atgtgaatta tgtcttccaa atctcagttc atgaatggta cacagccttc tctagtggct
1441 tcctaaaggt gtgtggtggc aaagtacttg agctcttcca gccttcagaa ctgagggcta
1501 tgatggtggg gaacagcaac tacaactggg aagaactgga agagactgcc atctacaagg
1561 gagattactc ggccacacat cccactgtaa aactattttg ggaaacattt catgagtttc
1621 cattggaaaa gaagaagaag tttctcttgt tcctgacagg cagcgatcgg attcccatct
1681 acggcatggc cagtctgcag attgtcatcc agtccacagc cagcggggag gagtacttgc
1741 cggtggccca cacttgctac aaccttcttg acctccccaa gtacagcagc aaagagattc
1801 tgagtgcccg gctgacccag gcccttgaca actatgaagg gtttagtttg gcctgaggct
1861 tctcagcttg tccagtattt cccttcgttc ctcagtgtcc acattgaggc ctatacagaa
1921 aatcatgggg agtgatttct atttttttat tgtctaagtg ggttgggact tttaaatact
1981 gagcctggtt gatgtgtttc tgggattgta tagcagtaaa caaccttttt gaaaaattag
2041 aggttgggga tggggtgaaa aattggccct tgtatgggag gtgtttttgt ttttgtttta
2101 aaccaaacta cccagtattc cttgcacttg
//